PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415366.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 287aa    MW: 33160.9 Da    PI: 8.6115
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.82.4e-1226110186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ + +Liea  ++  +l+rg+l++++W+ev++++     +  + +++ +qCk++++ ++k+yk +k+          s++ +f++l+
  XP_026415366.1  26 CWTEEATETLIEAWGNRYIQLSRGNLRQKDWKEVADAVndrqdSINKPRKTDIQCKNRIDTVKKKYKIEKAKPFP------SKWFFFTRLD 110
                     8*************************************88654444456799***************99987654......4677777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEAEDHRHHQ QQIRPYKGGG GGREDCWTEE ATETLIEAWG NRYIQLSRGN LRQKDWKEVA  60
DAVNDRQDSI NKPRKTDIQC KNRIDTVKKK YKIEKAKPFP SKWFFFTRLD NLIGSNSSAG  120
GTKKFIPPPI IRKSSPVNFN FRSSQNLDRN QNVPFFASGG GSTSKSRLNS VGSTESSYDD  180
EEEEEDDEEE EDLRFDDSYK GKRRADVDDS SDQTAFKELA KAITKFGETY ERIESLKQEQ  240
MMALERQKME LTKELEFQRM KMFMDAQFEI AKKKRPKHSS GGTGKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.12e-58Trihelix family protein