PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415257.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 275aa    MW: 33192.4 Da    PI: 8.8031
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix74.81.4e-2331113186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+ qe+++ + +r e+++++ ++k++k lWe +s+km+e+g+ rs+ qCk+kw+nl +ryk ++++e +     ++++p++++l+
  XP_026415257.1  31 QWSFQETKEFLVIRAELDQTFMETKRNKLLWEVISNKMKEKGYLRSSDQCKCKWKNLVTRYKGCETIEPES---MRQQFPFYNELQ 113
                     7********************************************************************84...45589****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEGGHHHQHH QQQQQQHSMS SMEQGDSRVP QWSFQETKEF LVIRAELDQT FMETKRNKLL  60
WEVISNKMKE KGYLRSSDQC KCKWKNLVTR YKGCETIEPE SMRQQFPFYN ELQTIFSARM  120
QRMLWLEAEG GPTSSGMRKK GSRLSSSDDD DNEESDEEKL VVKKKMRKGK GASTTSTSTG  180
NAYNSNLQHI LEEFMRQQVQ METQWRETVE LREKERRMRE MEWRQRMEDL EKERLLMDRN  240
WREREEQRRM REEARAEKRD ALITALLNKL RREDM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211216LREKER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.12e-61Trihelix family protein