PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415106.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 625aa MW: 69172.9 Da PI: 8.3069

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	80	100	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_026415106.1 80 CEICNKGFQRDQNLQLHRRGH 100 *******************88 PP
2	zf-C2H2	12.4	0.00048	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_026415106.1 154 WKCEKCSKKYAVQSDWKAHSKTC 176 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MQMMSGDGFS MNPSSTTRGF AQELPNNNSN LNLASSTTTA TNQGSGAAKR KRNLPGTPDP 60 DAEVIALSPK SLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVKKKVYI 120 CPEKSCVHHD PSRALGDLTG IKKHFSRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE 180 YKCDCGTLFS RKDSFITHRA FCDALAEESA RITSVPTNLS FRSDSMNDTL GNSQRMNHHL 240 PLGFENRGGG GGGQDYSRLN PSQFNSIFRP DFSGGETDMD RQNKPRLPLW LDQASLQHHH 300 HHQLNSIDHG NSNNAAAFLS TNSAGLPELV QMASTNFFGS SPIVDYGGGM NNQSQWGEKS 360 SLTTSSPSGL KEEGGNNKEQ MAVESSLASL YSNQQQNSSM NMSATALLQK AATIGATRSN 420 PNFNAGYGGV MSSNTSLSPS SDNTNSFNNN THSSSSQSRN EFHQLFMRQQ QQQQQQQQHQ 480 QQQQQKQHHP QQQQQSHDDG QSLNSLMMNS ISSMGPTTST VHAAIINNNN DSHHQGVMGL 540 SNEASNNLDR LMSAAEAVTN GSKQMNKQQF HQQQVDDDHS LTRDFLGVGA GEEEDDDGRH 600 HQFLQHELAK FASIGSGLDF NHYNR

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MQMMSGDGFS MNPSSTTRGF AQELPNNNSN LNLASSTTTA TNQGSGAAKR KRNLPGTPDP  60
DAEVIALSPK SLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVKKKVYI  120
CPEKSCVHHD PSRALGDLTG IKKHFSRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE  180
YKCDCGTLFS RKDSFITHRA FCDALAEESA RITSVPTNLS FRSDSMNDTL GNSQRMNHHL  240
PLGFENRGGG GGGQDYSRLN PSQFNSIFRP DFSGGETDMD RQNKPRLPLW LDQASLQHHH  300
HHQLNSIDHG NSNNAAAFLS TNSAGLPELV QMASTNFFGS SPIVDYGGGM NNQSQWGEKS  360
SLTTSSPSGL KEEGGNNKEQ MAVESSLASL YSNQQQNSSM NMSATALLQK AATIGATRSN  420
PNFNAGYGGV MSSNTSLSPS SDNTNSFNNN THSSSSQSRN EFHQLFMRQQ QQQQQQQQHQ  480
QQQQQKQHHP QQQQQSHDDG QSLNSLMMNS ISSMGPTTST VHAAIINNNN DSHHQGVMGL  540
SNEASNNLDR LMSAAEAVTN GSKQMNKQQF HQQQVDDDHS LTRDFLGVGA GEEEDDDGRH  600
HQFLQHELAK FASIGSGLDF NHYNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-102	C2H2 family protein