PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414828.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 832aa MW: 94731.5 Da PI: 5.8049

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.9e-20	123	210	1	91
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYneYA+++GF+vr+++++ + + ++i ++ +vCs+eg+ + +k r++r+++r gC a +++k+ + +k+ ++++++eH+Hel+p XP_026414828.1 123 DFYNEYARKIGFRVRIQRTNMNkAQRNRIHRQVLVCSCEGTYKMIRKP----RKRRETKRFGCLAAFEIKLITGDKYALIRFSSEHTHELVP 210 6*************99988833445588999*****998877....999*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 832 aa Download sequence
MEPESENPNT DVDTTTCTIN TDNITDNESL EDNKNNNGTV PESVSSDSSG EESPSNVVVQ 60 PSEDPIAEDP TPIITDGAVQ VGPKLASNDN GKSTEVDQIY RVYDELIEPE VGMIFDTAEE 120 AFDFYNEYAR KIGFRVRIQR TNMNKAQRNR IHRQVLVCSC EGTYKMIRKP RKRRETKRFG 180 CLAAFEIKLI TGDKYALIRF SSEHTHELVP PKFSHYLKTP RKLGFAQIGM TDKTQPPGTR 240 PLELTLPEAA GVSDQNSLEQ KTPAGFSIKG DAESLLGYLK QKKQENKHFF YSFRINEDGK 300 ICGVFFCDAK SRRDYGLFGD SVCFDTTFKT NNFDMVCVPV VGLSNHGLPI LFGCGLLDGE 360 STDAVAWLFM TFLEAMGGKK PESVFTDHSA AISDAVGLVF PESHHGLCLW HIFINASKQL 420 TKVVKASKTF APQFKAWIYE QETVEEFDRS WNKLLEDFDL RDNEWLQGLY ELREKWAQVY 480 SLGHFSAAMT TSERCENICK FLKAFFSNGS ILLRDFLDQY SKAMADRYEK EREAEKKTQL 540 TTPNWISGWS VEREASKVYT REIFYGFQDA LQKTIDLSLE LEKDDGTIRT YRATELEGQK 600 TIHSLVHNIS EQSASCTCRK FEFDGILCPH ALKLFRDLQY KSLPPRYYLK RWTRKVTDED 660 VFDPSGELIL SNNDPTSTVR SRYDDLTHIS QSIVAKGLKS DEMFTLIKSL LQEVKSKADA 720 HITSKDERRV AIQKIMPNPH QNLVSNLNEE ATQDVFGMMQ QQQPDYSQNG WQWMNRQAIH 780 AHGIHPQGIH PQDIIPGYNF AGSQQQRQFH PNELFMSQQG SSSQIPPPEM PH

Sequence ? help Back to Top

Protein Sequence Length: 832 aa Download sequence

MEPESENPNT DVDTTTCTIN TDNITDNESL EDNKNNNGTV PESVSSDSSG EESPSNVVVQ  60
PSEDPIAEDP TPIITDGAVQ VGPKLASNDN GKSTEVDQIY RVYDELIEPE VGMIFDTAEE  120
AFDFYNEYAR KIGFRVRIQR TNMNKAQRNR IHRQVLVCSC EGTYKMIRKP RKRRETKRFG  180
CLAAFEIKLI TGDKYALIRF SSEHTHELVP PKFSHYLKTP RKLGFAQIGM TDKTQPPGTR  240
PLELTLPEAA GVSDQNSLEQ KTPAGFSIKG DAESLLGYLK QKKQENKHFF YSFRINEDGK  300
ICGVFFCDAK SRRDYGLFGD SVCFDTTFKT NNFDMVCVPV VGLSNHGLPI LFGCGLLDGE  360
STDAVAWLFM TFLEAMGGKK PESVFTDHSA AISDAVGLVF PESHHGLCLW HIFINASKQL  420
TKVVKASKTF APQFKAWIYE QETVEEFDRS WNKLLEDFDL RDNEWLQGLY ELREKWAQVY  480
SLGHFSAAMT TSERCENICK FLKAFFSNGS ILLRDFLDQY SKAMADRYEK EREAEKKTQL  540
TTPNWISGWS VEREASKVYT REIFYGFQDA LQKTIDLSLE LEKDDGTIRT YRATELEGQK  600
TIHSLVHNIS EQSASCTCRK FEFDGILCPH ALKLFRDLQY KSLPPRYYLK RWTRKVTDED  660
VFDPSGELIL SNNDPTSTVR SRYDDLTHIS QSIVAKGLKS DEMFTLIKSL LQEVKSKADA  720
HITSKDERRV AIQKIMPNPH QNLVSNLNEE ATQDVFGMMQ QQQPDYSQNG WQWMNRQAIH  780
AHGIHPQGIH PQDIIPGYNF AGSQQQRQFH PNELFMSQQG SSSQIPPPEM PH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	175	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-118	FAR1 family protein