PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414800.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-YC

Protein Properties

Length: 298aa MW: 33083.4 Da PI: 4.6744

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	54.7	2.3e-17	6	85	18	97
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 ++++P +rikki++adedv +i+ +P l+ska elf+ +l r++ + +t+ ++++v++ ++fdfl +i XP_026414800.1 6 DTRFPASRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYDVTLRRGAKTMSSLHLKQCVQSFNVFDFLKEILS 85 5789***********************************************************************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MRKKLDTRFP ASRIKKIMQA DEDVGKIALA VPLLVSKALE LFLQDLCDRT YDVTLRRGAK 60 TMSSLHLKQC VQSFNVFDFL KEILSKVPDF GGSDAGGEDR ANKRRKTVVD EDNDSEEEGK 120 RNRISHETGH NSSSGRGRGR SRGRGRGRGR PLVDRESIRL EKCEGDPDMS PQHDNQNPET 180 ISPDNGIEPR ESADNMTTFG NTSDTEIRNF DLNVVLDDSG TNQLVRSDSG TTAAPSATAA 240 STSGPATSAE PPPEIKQHEE YPGWSISDMD KMSIDPLQLA QLNSKRLDEE EDYDEEEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	146	RGRGRSRGRGR
2	138	148	RGRGRSRGRGR
3	140	150	RGRGRSRGRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	1e-59	NF-YC family protein