PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414767.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 412aa    MW: 46014.2 Da    PI: 9.9234
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012172195123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++Cp Cg+ F  + + ++H++  H
  XP_026414767.1 172 FPCPTCGEIFQKPQLVEQHQSIkH 195
                     89******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MSSSSSSSSS IKSFTTFFSS LLVLLLFHLG CFFFVTNNHD HDHQLPNSSS NKKRKINPYF  60
SPLSSYSARK SNNNNNNNNN KPRKSLSSSW CFIKKIFTFR KHVNHDRTIS PSSLSSTASV  120
TTQPRPPTRN AVLSKSPTRK RRTPSSSSIA MSLDSEFSLI DHRSFPLRND IFPCPTCGEI  180
FQKPQLVEQH QSIKHAVTEL HDDDSSKNIV TIIFKTGWNN PIKNPPTIDR ILKIHNSSKI  240
LSRFEEYREV VKSKESRRSG GNRRRDERCI ADGNELLRFH CSTFICNLGQ NGKSSICSQQ  300
YCNVCGIIRS GFSPKMDGIT TVSSSWRAHV SFPEELEKEF AFMNIKRVML VCRVIAGRIG  360
EAGSGGGILE KGELAGFDSV LGGGCGGAID EEELLVYNPR AVLPCFAIIY NV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138143TRKRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.16e-86C2H2 family protein