PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414512.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 534aa    MW: 59851.6 Da    PI: 5.8695
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.77.5e-2967151187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe++aL+++r++m+  +r++ lk+plWeevs+k+++ g++r++k+Ckek+en+ k++k++k+g++   +++ +t+++fdqlea
  XP_026414512.1  67 RWPRQETMALLKIRSDMDVIFRDSTLKGPLWEEVSRKLADLGYHRNAKKCKEKFENVYKYHKRTKDGRST--KQDGKTYRFFDQLEA 151
                     8*******************************************************************98..577788*******85 PP
2trihelix103.21.9e-32386470186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+k e+ aLi++r+++e +++++  k+plWeevs  m++ g++r++k+Ckekwen+nk+ykk+ke++kkr +e+s+tcpyfdqle
  XP_026414512.1 386 RWPKVEIEALIKMRTDLEAKYQDNGPKGPLWEEVSTGMKKLGYNRNAKRCKEKWENINKYYKKVKESNKKR-PEDSKTCPYFDQLE 470
                     8*********************************************************************8.99***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MSSLIGNSGG GGGAAAAAAA TSTSTSTTGV NNESGSMNVD FPENERLRIT AGGLSEEGDR  60
NSSGGSRWPR QETMALLKIR SDMDVIFRDS TLKGPLWEEV SRKLADLGYH RNAKKCKEKF  120
ENVYKYHKRT KDGRSTKQDG KTYRFFDQLE ALENQFPSSS SSSLPADIKT QASSLPAATL  180
MAPTDPIIIT NSSQPTTITT AIPIPSKLPN ISTTEFMTTS PSTSSSMFSL GGEDSEGTPT  240
QNKKRKLTIF FENLMKEVIQ KQETLQKEFL EAIEKYEHQR MVREEQWKMQ ELARINREHE  300
ILIQERSIAA AKDAAVIAFL QKMSSSSTSQ QPTPSNNNNQ IIPVPLQEPE KIDDNPPPII  360
RPSSDNNNNN GNKDENSFLP RISSSRWPKV EIEALIKMRT DLEAKYQDNG PKGPLWEEVS  420
TGMKKLGYNR NAKRCKEKWE NINKYYKKVK ESNKKRPEDS KTCPYFDQLE ELYKQKNNRR  480
AILHNNSSSE PQQQTPEKGQ EQEQDLDDID GDEDEGEDGY EVAVHKTSMG TAAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-74Trihelix family protein