PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026414213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 187aa MW: 21664.4 Da PI: 8.8778 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 73.2 | 5.5e-23 | 41 | 123 | 3 | 89 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +++YAk+vGF vrk++++k+ ++g i + +vC++ g++ + +k+ ++r+++r++Cka ++ ++++++kwe+t+l+l+HnH+ XP_026414213.1 41 FKAYAKRVGFAVRKRTNRKN-EEGIIRSVAYVCNRAGNPVNMTKN---IVKPRKSNRCDCKAYVTARLDDEDKWEITQLKLDHNHTY 123 89**************9998.8888***************99888...99***********************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MVAASLDDAE KETGEKMQSN DEDEFYIGKK FETHLDLFSA FKAYAKRVGF AVRKRTNRKN 60 EEGIIRSVAY VCNRAGNPVN MTKNIVKPRK SNRCDCKAYV TARLDDEDKW EITQLKLDHN 120 HTYNPSLGRH YRQHRKVEPH VLHTIDLNDQ SGIPVEKTFR SVVNQFGGFD KVDCNEKDFR 180 NALDVIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-16 | FAR1 family protein |