PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026413421.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 321aa MW: 36734.4 Da PI: 8.0988 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00017 | 14 | 33 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cg sF + +Lk+H++ XP_026413421.1 14 TCEECGASFQKPAHLKQHMQ 33 6*****************96 PP | |||||||
2 | zf-C2H2 | 17.3 | 1.3e-05 | 41 | 65 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H XP_026413421.1 41 FSCPvnDCHSSYRRKDHLNRHLLQH 65 89*******************9887 PP | |||||||
3 | zf-C2H2 | 14.3 | 0.00012 | 70 | 93 | 1 | 22 |
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 ++Cp C++ F k n krHi XP_026413421.1 70 FSCPveGCNQKFAYKGNVKRHIED 93 89*******************975 PP | |||||||
4 | zf-C2H2 | 16.6 | 2.2e-05 | 111 | 135 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ Cgk+F+ s L++H +H XP_026413421.1 111 HICQeiGCGKVFKYASRLRKHEESH 135 679999***************9988 PP | |||||||
5 | zf-C2H2 | 15.5 | 5e-05 | 202 | 226 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +F +ksnL++H ++ H XP_026413421.1 202 KCSikGCECTFATKSNLNQHVKSvH 226 688889****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MEIDEKEEAK PNNTCEECGA SFQKPAHLKQ HMQCHSLERP FSCPVNDCHS SYRRKDHLNR 60 HLLQHQGKIF SCPVEGCNQK FAYKGNVKRH IEDMHEDEGS SSSNSQGQTQ HICQEIGCGK 120 VFKYASRLRK HEESHVKLES VEAICCEPDC MKYFANNDCL KAHVQSCHQH VLCEVCGTKQ 180 LKKNMKRHMR GHEIAGSTER IKCSIKGCEC TFATKSNLNQ HVKSVHLQLR PFACRFPDCG 240 QRFSFKHVRD NHEKSGSHVY VHGDFQEADE HFQARAKGGR KRTCPTVETL LRKRVVPPSH 300 TDSALNYGSE YLAWLLSAED D |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 181 | 187 | LKKNMKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-123 | C2H2 family protein |