PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412694.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 349aa MW: 38031.9 Da PI: 7.7876

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00085	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H +H XP_026412694.1 139 YECKTCNKCFSSFQALGGHRASH 161 99**********99999998887 PP
2	zf-C2H2	13.4	0.00023	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_026412694.1 242 HECSICGSEFSSGQALGGHMRRH 264 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEVANNNQED QTLMGSNEYL HVVKGKRTKR QRPLSPLTLP AMTTSTSSSG GGGGEDEKPD 60 NNNFPSPTTS VEFSVISSEE EEDMAHCLIL LAQGGHKRSK QIDDENGKMA RINSRRFYND 120 AAAATTSKAA GAGAGLYLYE CKTCNKCFSS FQALGGHRAS HKRPNNKGMC NEETTKTAIT 180 KTSSLLMLTE QESPQHHRFN DNSNNNNNII ASSTTCARPS LVLQMGNSSS LSAFNNNKSR 240 VHECSICGSE FSSGQALGGH MRRHRTTNAT TATTTTTTST NIDFSHHQDD QLNFSNKKAS 300 ARNVLSLDLN LPAPEEDYSS KFSLFSSSKQ QLQQQPLVFS ASALVDCHY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEVANNNQED QTLMGSNEYL HVVKGKRTKR QRPLSPLTLP AMTTSTSSSG GGGGEDEKPD  60
NNNFPSPTTS VEFSVISSEE EEDMAHCLIL LAQGGHKRSK QIDDENGKMA RINSRRFYND  120
AAAATTSKAA GAGAGLYLYE CKTCNKCFSS FQALGGHRAS HKRPNNKGMC NEETTKTAIT  180
KTSSLLMLTE QESPQHHRFN DNSNNNNNII ASSTTCARPS LVLQMGNSSS LSAFNNNKSR  240
VHECSICGSE FSSGQALGGH MRRHRTTNAT TATTTTTTST NIDFSHHQDD QLNFSNKKAS  300
ARNVLSLDLN LPAPEEDYSS KFSLFSSSKQ QLQQQPLVFS ASALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	5e-43	C2H2 family protein