PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412040.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 294aa    MW: 31584 Da    PI: 4.352
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-05270292223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+k+F++   L++H +  H
  XP_026412040.1 270 SCNTCSKTFNSEKGLESHTKAkH 292
                     7*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEFWGVEVKP GVPHKVTFTE NRLIHISQAA LGETKKGNEN VVLFVNFNGK KLVVGTLSMD  60
KCPQIQCDLV FEKEFEISHN SKNGSVYFSG YKGFLGPESP SDDSDDSDSD DEIRLVANGK  120
PEPLEGSKVG SSEAKPKVKI VEPTKGDESE DDDSEDSSDD EESDEEDNTG ASDGTNDEDE  180
SDDDEDESDD DSDDDTPDKA KQSNKRSAET SASKTPADKK AKLMSTPQKS GADGKKGSGV  240
HIATPHPAKK AGKGDKSKQE TPESAATPLS CNTCSKTFNS EKGLESHTKA KHCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.23e-29C2H2 family protein