PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411863.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 317aa MW: 35301.2 Da PI: 7.0782

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	95.6	5.4e-30	17	117	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaCk++r+kC+++C+lapyfp++ ++f+ v k+FGasn +kll + e++ a++++++eA+ar +dPv+G g+ ++l+++l+ l+++l XP_026411863.1 17 ACAACKYHRKKCSPECPLAPYFPSDTgGEDFQHVVKVFGASNFTKLLLKSAGAEQRSAAETMIMEARARRSDPVHGLGGIAKALSKKLNDLASQL 111 7*********************9978***************************************************************** PP DUF260 95 allkee 100 a ++++ XP_026411863.1 112 AFVNQQ 117 *99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDSKSEIGVK MVRNKKACAA CKYHRKKCSP ECPLAPYFPS DTGGEDFQHV VKVFGASNFT 60 KLLLKSAGAE QRSAAETMIM EARARRSDPV HGLGGIAKAL SKKLNDLASQ LAFVNQQNQF 120 HRHRSGVMQQ EHWKVESNEA SPSPLRAAVP FSSLQECGSS SFTQNDQFSP YFRTAQVYYD 180 ATKPSGSSIS ANLGDTSMAK VKHHNKESDG LWENSDHFRA GVVFKQSKDA EGLTKTSDQE 240 YKGIVRNYED YVNLSQEKKN NVKCSMDVEE PDLKNCIYYN EWTAKFNQDG EEAAAEYSHH 300 LKEEPECSVD STAKGGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	1e-22	LBD family protein