PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026410729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 212aa MW: 24297.7 Da PI: 8.2701 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 60.2 | 6.3e-19 | 43 | 143 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fY+e +++ s+rk++s+ + ++g i + fvCs+eg +++++ ++++++++++ rt+Cka++++ +++ +++w+v+++++e XP_026410729.1 43 FYKECGRSKKISTRKRSSYATAQKGGISRVIFVCSCEGICDRDSNYddfdgevepeaEKRRKQNTSTMRTNCKAMMHIVLDTkRKTWYVNTFVHE 137 9999999999*****************************999988899*******9777777888899************9989*********** PP FAR1 85 HnHela 90 HnHe++ XP_026410729.1 138 HNHEMV 143 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MHTIAENDDV ECDGMPYCNE MPLENGKPYV GLAFSYIEDA DLFYKECGRS KKISTRKRSS 60 YATAQKGGIS RVIFVCSCEG ICDRDSNYDD FDGEVEPEAE KRRKQNTSTM RTNCKAMMHI 120 VLDTKRKTWY VNTFVHEHNH EMVSPKKRAL MRSNKYMPLE AKSMAEAFNK NKLPVGKVVL 180 LFGQIENATF TPRDVYNHLR TVRKSLLDVG DA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 127 | KRRKQNTSTMRTNCKAMMHIVLDTKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-12 | FAR1 family protein |