PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410632.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 408aa MW: 45409.6 Da PI: 8.706

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.6e-05	295	317	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++sFs+ L H+r+H XP_026410632.1 295 HQCKYCDESFSTGQALGGHQRRH 317 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MAKPLMEDQK KRMSLVVFRP KTQGSGNGGS VKQAYHHRQV TPEKTTMKVL LQLRNKVPKS 60 YSEEEDSEET YSSSKLGSDY GNSSYSPQYV SSTAGKSAGS RLPRWITTGR RGRKGSRPSA 120 SASASSYNSE KEEEPPFGDM EAAEALLMLS KGLSLDETRK LQTETDSIVK FPEYNLIKKR 180 KLEDSGVGYA EERLKIPRIE KETNNYRDES SMDTMTKKNV EAIHKQVPTL LSSASGNFRC 240 DNCGKSFGCY QALGGHKSSC NSNYLKSEGG ESAPQGSMRK MNNESSKDLA NSGPHQCKYC 300 DESFSTGQAL GGHQRRHKRE PVELHVSRSS VSPPKNISGN SSSPTNSLTS VQEAAEENVT 360 SKKIILLDLN EDPPMEEDDE DIHQWKRMMK IHQWKRMTDI LASDVLNN

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MAKPLMEDQK KRMSLVVFRP KTQGSGNGGS VKQAYHHRQV TPEKTTMKVL LQLRNKVPKS  60
YSEEEDSEET YSSSKLGSDY GNSSYSPQYV SSTAGKSAGS RLPRWITTGR RGRKGSRPSA  120
SASASSYNSE KEEEPPFGDM EAAEALLMLS KGLSLDETRK LQTETDSIVK FPEYNLIKKR  180
KLEDSGVGYA EERLKIPRIE KETNNYRDES SMDTMTKKNV EAIHKQVPTL LSSASGNFRC  240
DNCGKSFGCY QALGGHKSSC NSNYLKSEGG ESAPQGSMRK MNNESSKDLA NSGPHQCKYC  300
DESFSTGQAL GGHQRRHKRE PVELHVSRSS VSPPKNISGN SSSPTNSLTS VQEAAEENVT  360
SKKIILLDLN EDPPMEEDDE DIHQWKRMMK IHQWKRMTDI LASDVLNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	3e-14	C2H2 family protein