PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410531.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 552aa MW: 64880.3 Da PI: 9.229

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.4	2.8e-14	19	83	25	90
FAR1 25 ngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++i +r +vCs+egk++++ + + ++r + rtgC+akl++k+++ d+k+ + +++++HnH l+ XP_026410531.1 19 IKTISRRVLVCSNEGKSRQHPRG--SPLKRRLHARTGCEAKLVIKLQNdDSKYSIVEFVEKHNHVLT 83 567999***********9988..89999*************99*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MLETSGLVYE KIQLLTAKIK TISRRVLVCS NEGKSRQHPR GSPLKRRLHA RTGCEAKLVI 60 KLQNDDSKYS IVEFVEKHNH VLTRSDQVHM LRSQRKIESS QARLIENMHY AGISQKNIFA 120 YLSVESGGYE NLNFTQMDCY NHIQRRRRQD ILKKGDAEHL LEYFQEMQKD NPYFFYAIEM 180 DATGQLCSCF WSDDKCRMDY SFFGDVLVFD TTFGTNEYDK PFSPFVGVNN HGQTTLFGCA 240 LLLDESTDSF VWLFKTFLSA MNGKHPQKIF TDQAEPIMNA IKQVFPGTHH RLCFWHIFQL 300 AAKHLSHIFV SSEFFTKYFK RCIYKNKTEE EFESMCKSFL EKYKLTENKW LQTLYKKKEK 360 WAQVYGQVHF CAGMTTTQRS EGMNNFLKKY FKRTLSLKSF VVEYDKVLDS RRAKEKTEDF 420 KSMQRKPTLH SHWALEVRAA ERYPTKMFAY FQKEYKETLD LILEIIDQDG SIYTYKVTSF 480 KFSSARTVTF NSSDNSVQCS CKHFQFMGMI CAHSMNILHT HQVYDLPSQY FLSRWTTYAK 540 NGVGIEEPKK PI

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MLETSGLVYE KIQLLTAKIK TISRRVLVCS NEGKSRQHPR GSPLKRRLHA RTGCEAKLVI  60
KLQNDDSKYS IVEFVEKHNH VLTRSDQVHM LRSQRKIESS QARLIENMHY AGISQKNIFA  120
YLSVESGGYE NLNFTQMDCY NHIQRRRRQD ILKKGDAEHL LEYFQEMQKD NPYFFYAIEM  180
DATGQLCSCF WSDDKCRMDY SFFGDVLVFD TTFGTNEYDK PFSPFVGVNN HGQTTLFGCA  240
LLLDESTDSF VWLFKTFLSA MNGKHPQKIF TDQAEPIMNA IKQVFPGTHH RLCFWHIFQL  300
AAKHLSHIFV SSEFFTKYFK RCIYKNKTEE EFESMCKSFL EKYKLTENKW LQTLYKKKEK  360
WAQVYGQVHF CAGMTTTQRS EGMNNFLKKY FKRTLSLKSF VVEYDKVLDS RRAKEKTEDF  420
KSMQRKPTLH SHWALEVRAA ERYPTKMFAY FQKEYKETLD LILEIIDQDG SIYTYKVTSF  480
KFSSARTVTF NSSDNSVQCS CKHFQFMGMI CAHSMNILHT HQVYDLPSQY FLSRWTTYAK  540
NGVGIEEPKK PI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-130	FAR1 family protein