PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410272.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 818aa MW: 94471.7 Da PI: 8.5619

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.9	2.2e-20	71	156	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA++ GFsvr+s+s++ ++g+ +++ +vCs +g+r ++k++ ++ +++raetr +C a++k+++++++k+ + ++ H+H XP_026410272.1 71 KFYNTYAYNFGFSVRRSTSHSF-NDGKLKDKLYVCSAQGTRVKDKRD-VNVKKHRAETRFECLARMKITLTQTSKYAIVDFYAYHTHI 156 6**************98887.8999*************999.99***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MEPPPPLEIR RRLDFNRDID LNFSAPEECY DDEKTNPVSF SKRVDFVHSK IPKELIPEIG 60 MEFETEDEAF KFYNTYAYNF GFSVRRSTSH SFNDGKLKDK LYVCSAQGTR VKDKRDVNVK 120 KHRAETRFEC LARMKITLTQ TSKYAIVDFY AYHTHITTTP SKSHLFRSQR RLSTSIITQA 180 DMDDASGIAP RETMEFLSRQ SGGRQNVGII PVDYKNYLRS KRTRRMETGD TGGVLEYLQK 240 MKLNDPNFFP AIQVDEDDLI TNIFWADSRM IVDYDYFGDV VSFDTTQRKN KDGRPFAMFV 300 GVNNHRQTII FGAALLYDET AETFMWLFDT FDETMSGKKP KIIFTDQDAA MAKALASQWP 360 ESRHRLCIWH MFQNAAKHLS HEFHKFNDFA KDFTKCVYDY ENEVEFTDAW KNMLAKYNLH 420 NNDWLEGLFS LREKWALVYG RDTFCAEMTT TQRSESMNSV LKKYISYKYD LVLFFEHFER 480 MVDARRYHEL TMDFKASQSY PAMTLPVKIL KHVAAIYTPA VFELFQKELC RSHDCAVTII 540 SESETMSKYA ITPHGKEYDR TVIFDSLNNN VSCSCRKFEF AGYLCSHALK VLSEKNIKSI 600 PTQYILKRWT KDVKSGSITG GSNSVGTNDR KVDTVRRYRE LCRLHIQLAT RDSGSEEAYK 660 IALLALSNML KEVDAKLRGL KVQEDLENQN ISPAVDKEIN LNASFNVDNY NVRGIKIRPK 720 TTIDTSSVRP KNVLEKAVNS KKKRISKTME SQNNEEIVPA FDFQSQMMSQ VFQVPNALVR 780 SISMASTDTV PAPGRPYVMP AILLKQISVI ISMSVIIF

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MEPPPPLEIR RRLDFNRDID LNFSAPEECY DDEKTNPVSF SKRVDFVHSK IPKELIPEIG  60
MEFETEDEAF KFYNTYAYNF GFSVRRSTSH SFNDGKLKDK LYVCSAQGTR VKDKRDVNVK  120
KHRAETRFEC LARMKITLTQ TSKYAIVDFY AYHTHITTTP SKSHLFRSQR RLSTSIITQA  180
DMDDASGIAP RETMEFLSRQ SGGRQNVGII PVDYKNYLRS KRTRRMETGD TGGVLEYLQK  240
MKLNDPNFFP AIQVDEDDLI TNIFWADSRM IVDYDYFGDV VSFDTTQRKN KDGRPFAMFV  300
GVNNHRQTII FGAALLYDET AETFMWLFDT FDETMSGKKP KIIFTDQDAA MAKALASQWP  360
ESRHRLCIWH MFQNAAKHLS HEFHKFNDFA KDFTKCVYDY ENEVEFTDAW KNMLAKYNLH  420
NNDWLEGLFS LREKWALVYG RDTFCAEMTT TQRSESMNSV LKKYISYKYD LVLFFEHFER  480
MVDARRYHEL TMDFKASQSY PAMTLPVKIL KHVAAIYTPA VFELFQKELC RSHDCAVTII  540
SESETMSKYA ITPHGKEYDR TVIFDSLNNN VSCSCRKFEF AGYLCSHALK VLSEKNIKSI  600
PTQYILKRWT KDVKSGSITG GSNSVGTNDR KVDTVRRYRE LCRLHIQLAT RDSGSEEAYK  660
IALLALSNML KEVDAKLRGL KVQEDLENQN ISPAVDKEIN LNASFNVDNY NVRGIKIRPK  720
TTIDTSSVRP KNVLEKAVNS KKKRISKTME SQNNEEIVPA FDFQSQMMSQ VFQVPNALVR  780
SISMASTDTV PAPGRPYVMP AILLKQISVI ISMSVIIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-126	FAR1 family protein