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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026409535.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28911.5 Da PI: 9.0816 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.8 | 2.2e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRrng+lKKA+ELSvLCdaev +iifss+gklye++s XP_026409535.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSSRGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 106.5 | 3e-35 | 77 | 171 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++s++e++++s++qe++kLk+++e+Lqr+qRhllGedL++Ls+keLq+Le+qLe +l + R++K+++++eq+eel++ke+ l ++nk+L++kle XP_026409535.1 77 QDSSTAERETQSWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSVKELQSLEKQLEGALAQARQRKTQIMMEQMEELRRKERHLGDINKQLKNKLE 171 556689999***********************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVGLIIFSS RGKLYEFASA 60 GMNRTLERYQ HCCYTPQDSS TAERETQSWY QEVSKLKAKY ESLQRSQRHL LGEDLGPLSV 120 KELQSLEKQL EGALAQARQR KTQIMMEQME ELRRKERHLG DINKQLKNKL ETEGQGSLRA 180 IQASWESSAM VANNNYSVHP SQSNSMDCEP TLQIGYHNYV QQHQQQQQEE ANLARNVGNS 240 SENNFIQGWA L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-104 | MIKC_MADS family protein |