PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409450.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 434aa MW: 48609.3 Da PI: 8.0287

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.3	1.4e-40	196	272	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v g+eqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk++ XP_026409450.1 196 RCQVEGCHVALIHAKDYHRRHKVCEMHSKAPKVVVLGIEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSS 272 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MENEEQQHQH QNHQNNHNNM NGRGQNGSSN NYSCDFWELG TNSWSNNNSY TNTSSEDKYN 60 NNTSRTTATM FSNNPTSSHS QTQHLNLHTN LHPNLHYHNH QQLHHSLYTG GGSNLHPDPH 120 LTCLKLGKRQ YFEDVNNGGP TVMGDRHVSG FPMGLMKRGR SYDGVDVAVL GGGPSSSSLS 180 SIGVGLIGSS TVVVPRCQVE GCHVALIHAK DYHRRHKVCE MHSKAPKVVV LGIEQRFCQQ 240 CSRFHVISEF DDSKRSCRRR LAGHNERRRK SSSSDATSSR NSSSQESRST DGRISYISPT 300 NGRVHSLLSS KSNSWVSPSD LSTRSSAALR ELIDENRAAV LARQLFLDQN WHQQGMDHTN 360 HNSQVEILST VPLQNQFPGS SNWNRFQQSD AHVTLDLMQT PSPPFGFLSG RSKTKEEEEE 420 CCEIWKSLEG THVV

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MENEEQQHQH QNHQNNHNNM NGRGQNGSSN NYSCDFWELG TNSWSNNNSY TNTSSEDKYN  60
NNTSRTTATM FSNNPTSSHS QTQHLNLHTN LHPNLHYHNH QQLHHSLYTG GGSNLHPDPH  120
LTCLKLGKRQ YFEDVNNGGP TVMGDRHVSG FPMGLMKRGR SYDGVDVAVL GGGPSSSSLS  180
SIGVGLIGSS TVVVPRCQVE GCHVALIHAK DYHRRHKVCE MHSKAPKVVV LGIEQRFCQQ  240
CSRFHVISEF DDSKRSCRRR LAGHNERRRK SSSSDATSSR NSSSQESRST DGRISYISPT  300
NGRVHSLLSS KSNSWVSPSD LSTRSSAALR ELIDENRAAV LARQLFLDQN WHQQGMDHTN  360
HNSQVEILST VPLQNQFPGS SNWNRFQQSD AHVTLDLMQT PSPPFGFLSG RSKTKEEEEE  420
CCEIWKSLEG THVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	4e-32	SBP family protein