PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026409316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 201aa MW: 22885.6 Da PI: 6.7968 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.7 | 1.1e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr g+lKKA+ELSvLCda+v +iifss+gklye + XP_026409316.1 9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDADVGIIIFSSHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 57.7 | 5e-20 | 85 | 173 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ ++++++a +k+ei+ Lq+ +R + G + + + l+eL Le++Le +++iRs+K+++++++i+ l++ke l+ +n+ L++k+ee XP_026409316.1 85 KQSLESEEDIATMKQEIQLLQKGLRYMFGGGAGIMGLEELDALEKHLELWIRNIRSTKMQIMFQEIQMLKNKEGILKAANEILQEKIEE 173 445568899******************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MARGKVQLKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD ADVGIIIFSS HGKLYELATK 60 GTMEEVIDRY AETSRGAQIA EGVQKQSLES EEDIATMKQE IQLLQKGLRY MFGGGAGIMG 120 LEELDALEKH LELWIRNIRS TKMQIMFQEI QMLKNKEGIL KAANEILQEK IEEQNVIFDM 180 SPIMTGFPYQ LTIPSDTFNT F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 5e-77 | MIKC_MADS family protein |