PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408837.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CPP

Protein Properties

Length: 652aa MW: 69984.5 Da PI: 8.6494

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.9	2e-13	175	214	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 + k+CnCk+s+Clk+YCeCfa+g++C+ C+C++C+N+ e+ XP_026408837.1 175 KPKQCNCKNSRCLKLYCECFASGVYCDG-CNCTNCCNNVEN 214 5699**********************.******9875 PP
2	TCR	50.9	3e-16	259	298	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN + XP_026408837.1 259 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNYD 298 589***********************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MEKVDGGKDF PPEKVESETT KTHTEGGNTV NGTTVLKKLA RQLDFTALSS SSSSTSNSST 60 TPTPKTTSTT TPVAILPKPH PQQQQQQQQN QIPQPKGPSI QPRPQTPLPV PHVKSSLSSS 120 PAVPPAKSLS SSPFVVPPPP PPPLVARPTL LPVKTESPGA RPRANAEVKD GTPKKPKQCN 180 CKNSRCLKLY CECFASGVYC DGCNCTNCCN NVENEASRQE AVEATLERNP NAFRPKIASS 240 PHGVHDIKEE KGDVSLIVKH NKGCHCKKSG CLKKYCECFQ ANILCSENCK CMDCKNYDGS 300 EERRALFHED HNNQSNALYM QQVAANAAIF GAIGTSGYGA GAYGSPPISK KRKLHENFFP 360 ATAKDSPHRL AQTSQANHLR PSSTFSTSSS SPGVRAVNPA QTGSSKPTYR SLLADVLQPQ 420 QIKDICKILV VVANSVPKPR TTDKRAIVEN QAESQENTGS IVAPSSRQSM SVEAGIQETS 480 KDDPSSGNLS ENICMDDPGS DGSDLQKERP MSPGTRALMC DEQDTMFMAA ASPNGRLGNG 540 GSKPLPSAYG PETTGLYAEQ ERRVLTAFRD SLQNLVQRGT IKETNYSSLT TRTEPPGSQM 600 IQPIGNGTVR PLHPASTTGL SQPLSAPNNN VSLKVGHPNE NGEIRPKVEK QM

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MEKVDGGKDF PPEKVESETT KTHTEGGNTV NGTTVLKKLA RQLDFTALSS SSSSTSNSST  60
TPTPKTTSTT TPVAILPKPH PQQQQQQQQN QIPQPKGPSI QPRPQTPLPV PHVKSSLSSS  120
PAVPPAKSLS SSPFVVPPPP PPPLVARPTL LPVKTESPGA RPRANAEVKD GTPKKPKQCN  180
CKNSRCLKLY CECFASGVYC DGCNCTNCCN NVENEASRQE AVEATLERNP NAFRPKIASS  240
PHGVHDIKEE KGDVSLIVKH NKGCHCKKSG CLKKYCECFQ ANILCSENCK CMDCKNYDGS  300
EERRALFHED HNNQSNALYM QQVAANAAIF GAIGTSGYGA GAYGSPPISK KRKLHENFFP  360
ATAKDSPHRL AQTSQANHLR PSSTFSTSSS SPGVRAVNPA QTGSSKPTYR SLLADVLQPQ  420
QIKDICKILV VVANSVPKPR TTDKRAIVEN QAESQENTGS IVAPSSRQSM SVEAGIQETS  480
KDDPSSGNLS ENICMDDPGS DGSDLQKERP MSPGTRALMC DEQDTMFMAA ASPNGRLGNG  540
GSKPLPSAYG PETTGLYAEQ ERRVLTAFRD SLQNLVQRGT IKETNYSSLT TRTEPPGSQM  600
IQPIGNGTVR PLHPASTTGL SQPLSAPNNN VSLKVGHPNE NGEIRPKVEK QM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-126	CPP family protein