PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026408546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Trihelix | ||||||||
Protein Properties | Length: 406aa MW: 46539.4 Da PI: 4.0991 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40.7 | 6e-13 | 168 | 254 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkik.egekkrtsessstcpyfdqle 86 Wt++ + +L++ ++ +l+r++l+ W ev+kk+ + r+ +qC+++++ l+k+ykk+k ++e+ ++++ss +++yf++++ XP_026408546.1 168 WTEHATFVLLDTWGDKFLQLGRKSLRLDEWIEVAKKVsLLSNVVRTDTQCRNRLDTLKKKYKKEKlKIEETGNNNSSCKWVYFKKMD 254 *************************************667789*********************94455566899999********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence |
MDRGEMNDAE EEARYPYDEQ EGDEYEEGGD DGEEEVEEED EGEEVEVVGE EEEEEENVVQ 60 RVKEEVEEVD EQEQLQQDHA GGDDDDYEEE DEDDTDDDDE DDNVDGGGND NGMDDDEDSE 120 RNGKKRKLKD LSLSYEFAPR VVVPQPSAIA MSVPKSSYGG RKNAAADWTE HATFVLLDTW 180 GDKFLQLGRK SLRLDEWIEV AKKVSLLSNV VRTDTQCRNR LDTLKKKYKK EKLKIEETGN 240 NNSSCKWVYF KKMDMLMNVS PRQPGLACGM DSREYVFTNP RVYLNHSNGL DEMRDSPGNS 300 ESTEADDDNS DGLPPKKARY VENGVERSSF RLLADSIKKF GDIHAKIENS KRQQMLELEK 360 MRMEFHRDLE LHRRKILERA QAEIAKMRDE DDEEFGGSAS TGDMSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 1e-64 | Trihelix family protein |