PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407456.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 1596aa MW: 180887 Da PI: 5.46

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00061	1504	1526	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ CgksF ++ +L++H r+H XP_026407456.1 1504 CSvkGCGKSFFSHKYLMQHRRVH 1526 77779****************99 PP
2	zf-C2H2	14.1	0.00014	1562	1586	1	23
EEETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt..H 23 y+C dC++sF+ s++ rH r+ H XP_026407456.1 1562 YQCRDCNQSFRFVSDFSRHKRKtgH 1586 9*******************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1596 aa Download sequence
MATSSVAAES EVPLWLRNLQ LAPEYHPTLE EFQDPISYIL KIEKDASKYG ICKIIPPISS 60 PPKKTAITQL NRSLSARNPN SISKTLPTFT TRHQQIGFCP RKPRPVQKPV WQSGEAYTVQ 120 QFEAKAKAFE RSYLKKSAKK KVFSELEIEA LFWKASRDKP FTVEYANDMP GSAFVPINEK 180 KWRESGIPTT VGETVWNMRG VSRHKESLLR FMKEDIPGVT SPMVYLAMLF SWFAWHVEDH 240 DLHSLNYLHM GAGKTWYGVP KDAAVAFEEV IRVHGYGGEV NPLVTFATLG ERTTVLSPEV 300 LIGAGIPCCR LVQNVGEFVV TFPRAYHSGF SHGFNCGEAA NIATPEWLTV ANEAAIRRAS 360 INCPPMVSHL QLLYTLALSL CPSVPRNISS DEPRSSRLKN KKRSEGQTMI KELFVQNMIQ 420 NNNLIHLLIE QGASCVLLPQ SSLETFECSN LGVGSQVKVK PRLSLGLCTN KESLEASKTS 480 LSNMDRNMGV RPYNGVASLK GKSNLELGGN RLSSSSLSRN GSYENTNLFT STSVIGNPNK 540 TSTSQSSRLI EQGLFTCVTC GVLTFGCAAV IQPSDVAARY LRSADCGFFN EWAVGSGDRY 600 PVAEEVDDTP EADHPSGQTE KSDHDGLHNV DLVPERVKSA LDTGTNKDVT SLDLLAFAYG 660 NSSDSEDDNA NDRGDCSPFH QHSEFLSNGF GSHSLEHDSV DAIVESSSYL SRRQGYGTDR 720 FIKTYQRTKV SDRKQKQRSH DADIKGVEAP HIFSENNTRE LVHRESIGDK DSCRNTTLTG 780 YVESHQGDLS NSSTRHCLNE PSKSTNAELP LKNSNKQIVQ SSDVDSTRKH IFCLEHAVEV 840 ENQLRPIGGV HMLLICNPEY SQIQVEAKSL SEEMGVKKHW NAIPFIEASK DDIERTQSAL 900 YDEEAIAGNG DWSVKLGVNL YYSVSLSQSP IYSKQMPYNP VIYKAFGRSS PAFNSPTDPE 960 FSTKGSGKQK KIFVAGRWCG KVWMSNQVHP YLVDRQTQDH PMTFHSHTVR EFKLEGTPNM 1020 AHLTEQLLVP KKNSSPCART PAIVNRKPTR KRKNTSEKPA TKRHQSSQLD NRLVEAEVEI 1080 EDEDEPAAEE LSPESDSPPL RERLLRSGGR TKHEAARHLS STLRGGRHYG SNMYIKDDID 1140 DEDEVAAEES SPESDYPLLQ ERLLRNGGRM KDDTEDEDED EATAIEFSPE SDLPLLPERP 1200 RRSGGRMKHE TPRHLSSTLR GDRRHDSNMS TKDEIEGGYH SRLRRTPRKR FVAEEEEEEE 1260 EELVVVEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEKE NNVPSARPRR 1320 TTSWKHVVAE EEEEEEEEEE EEEENNIPSA QSRRRAPWRS VIAEEEEEEE EEEEEEDNIP 1380 SKRLRGKTSW RPVVAEEEEK EEYNIPSKRP RRRTSWKPVI AEEEEEDDNL VVVRGKGKRR 1440 VKGKVKIEEE KQPMRRARKV SYASSSRNKL PLEDAEGEYH CNVEGCTMGF SSKQELSLHK 1500 KNMCSVKGCG KSFFSHKYLM QHRRVHSDDR PLKCPVRGCM MTFKWPWSRT EHIRVHTGDR 1560 PYQCRDCNQS FRFVSDFSRH KRKTGHSVKK GRGGKK

Sequence ? help Back to Top

Protein Sequence Length: 1596 aa Download sequence

MATSSVAAES EVPLWLRNLQ LAPEYHPTLE EFQDPISYIL KIEKDASKYG ICKIIPPISS  60
PPKKTAITQL NRSLSARNPN SISKTLPTFT TRHQQIGFCP RKPRPVQKPV WQSGEAYTVQ  120
QFEAKAKAFE RSYLKKSAKK KVFSELEIEA LFWKASRDKP FTVEYANDMP GSAFVPINEK  180
KWRESGIPTT VGETVWNMRG VSRHKESLLR FMKEDIPGVT SPMVYLAMLF SWFAWHVEDH  240
DLHSLNYLHM GAGKTWYGVP KDAAVAFEEV IRVHGYGGEV NPLVTFATLG ERTTVLSPEV  300
LIGAGIPCCR LVQNVGEFVV TFPRAYHSGF SHGFNCGEAA NIATPEWLTV ANEAAIRRAS  360
INCPPMVSHL QLLYTLALSL CPSVPRNISS DEPRSSRLKN KKRSEGQTMI KELFVQNMIQ  420
NNNLIHLLIE QGASCVLLPQ SSLETFECSN LGVGSQVKVK PRLSLGLCTN KESLEASKTS  480
LSNMDRNMGV RPYNGVASLK GKSNLELGGN RLSSSSLSRN GSYENTNLFT STSVIGNPNK  540
TSTSQSSRLI EQGLFTCVTC GVLTFGCAAV IQPSDVAARY LRSADCGFFN EWAVGSGDRY  600
PVAEEVDDTP EADHPSGQTE KSDHDGLHNV DLVPERVKSA LDTGTNKDVT SLDLLAFAYG  660
NSSDSEDDNA NDRGDCSPFH QHSEFLSNGF GSHSLEHDSV DAIVESSSYL SRRQGYGTDR  720
FIKTYQRTKV SDRKQKQRSH DADIKGVEAP HIFSENNTRE LVHRESIGDK DSCRNTTLTG  780
YVESHQGDLS NSSTRHCLNE PSKSTNAELP LKNSNKQIVQ SSDVDSTRKH IFCLEHAVEV  840
ENQLRPIGGV HMLLICNPEY SQIQVEAKSL SEEMGVKKHW NAIPFIEASK DDIERTQSAL  900
YDEEAIAGNG DWSVKLGVNL YYSVSLSQSP IYSKQMPYNP VIYKAFGRSS PAFNSPTDPE  960
FSTKGSGKQK KIFVAGRWCG KVWMSNQVHP YLVDRQTQDH PMTFHSHTVR EFKLEGTPNM  1020
AHLTEQLLVP KKNSSPCART PAIVNRKPTR KRKNTSEKPA TKRHQSSQLD NRLVEAEVEI  1080
EDEDEPAAEE LSPESDSPPL RERLLRSGGR TKHEAARHLS STLRGGRHYG SNMYIKDDID  1140
DEDEVAAEES SPESDYPLLQ ERLLRNGGRM KDDTEDEDED EATAIEFSPE SDLPLLPERP  1200
RRSGGRMKHE TPRHLSSTLR GDRRHDSNMS TKDEIEGGYH SRLRRTPRKR FVAEEEEEEE  1260
EELVVVEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEKE NNVPSARPRR  1320
TTSWKHVVAE EEEEEEEEEE EEEENNIPSA QSRRRAPWRS VIAEEEEEEE EEEEEEDNIP  1380
SKRLRGKTSW RPVVAEEEEK EEYNIPSKRP RRRTSWKPVI AEEEEEDDNL VVVRGKGKRR  1440
VKGKVKIEEE KQPMRRARKV SYASSSRNKL PLEDAEGEYH CNVEGCTMGF SSKQELSLHK  1500
KNMCSVKGCG KSFFSHKYLM QHRRVHSDDR PLKCPVRGCM MTFKWPWSRT EHIRVHTGDR  1560
PYQCRDCNQS FRFVSDFSRH KRKTGHSVKK GRGGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein