PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407362.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 398aa MW: 45206.6 Da PI: 6.2551

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.2	1.9e-27	71	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W +e+++Li++rrem+ ++++k++k+lWe++s kmre+gf rsp +C++kw+nl k++kk+k+++ ++ ++s + +y+++l+ XP_026407362.1 71 WVSEETRLLINLRREMDGLFNTSKSNKHLWEQISTKMREKGFDRSPSMCTDKWRNLLKEFKKMKHHQDRG--GVSPKLAYYKELD 153 ******************************************************************97..899999***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MYLSEKSNQI DFYNNKEVEE EREMIMEVVN NGGLHPHHHH HQQQPQQQMV LADSSGSDHE 60 MRPPKKRAET WVSEETRLLI NLRREMDGLF NTSKSNKHLW EQISTKMREK GFDRSPSMCT 120 DKWRNLLKEF KKMKHHQDRG GVSPKLAYYK ELDELIKERN KNGTYSKNST PLSTKVDAYI 180 QFSDKGIEDA AIPFGPVEEG GGSAALNLEK SLDQDGQPLA IAAAEAVGGS GIPPWNWRET 240 SGNGGEGIHS FAGRVISVKW GDFTRKIGID GTTDAIKEAI KSAFGLRTRR AFWLEDEAEV 300 IRSLDRDMPL GTYTLHLDDG ITIKICFYDD SGRTSIRPEE KTLYTEEDFR DLLTRRGWTG 360 LRELNAFRSV DSNALRSVDS LDELRPGAIY QGVCEIAR

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MYLSEKSNQI DFYNNKEVEE EREMIMEVVN NGGLHPHHHH HQQQPQQQMV LADSSGSDHE  60
MRPPKKRAET WVSEETRLLI NLRREMDGLF NTSKSNKHLW EQISTKMREK GFDRSPSMCT  120
DKWRNLLKEF KKMKHHQDRG GVSPKLAYYK ELDELIKERN KNGTYSKNST PLSTKVDAYI  180
QFSDKGIEDA AIPFGPVEEG GGSAALNLEK SLDQDGQPLA IAAAEAVGGS GIPPWNWRET  240
SGNGGEGIHS FAGRVISVKW GDFTRKIGID GTTDAIKEAI KSAFGLRTRR AFWLEDEAEV  300
IRSLDRDMPL GTYTLHLDDG ITIKICFYDD SGRTSIRPEE KTLYTEEDFR DLLTRRGWTG  360
LRELNAFRSV DSNALRSVDS LDELRPGAIY QGVCEIAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-154	Trihelix family protein