PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407312.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 478aa MW: 54071.4 Da PI: 8.3332

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.2	5.2e-19	131	222	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf....erspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 +Wt++e+ aLi+ + e++ +lrrg+l++ +Weev++++++r +++++qC++k e+l+kry+ + + + + + ss++++f++++ XP_026407312.1 131 CWTHEETSALIDSYHEKWYSLRRGNLRASHWEEVADAVARRCNlvvpSKTSVQCRHKVEKLRKRYRTEVQKSLMTpaHHRFSSSWVFFKRMD 222 8***********************************55432234589*************99877654433688899*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MVWWLYGFAI VIPIHPWVAV ADPLLSLISD FSFSLSTPNN NNYPTTTQFF NNVHFTHHHL 60 PLLFQLHHHP FLSLTTTTNP NPNSSYLFIT MDMDSQNLSP LSTPNQQQKQ TTSPSSLTKP 120 SSITRRVPPP CWTHEETSAL IDSYHEKWYS LRRGNLRASH WEEVADAVAR RCNLVVPSKT 180 SVQCRHKVEK LRKRYRTEVQ KSLMTPAHHR FSSSWVFFKR MDLMEKGPSS TATGVDEDEQ 240 GGGDEEEEEE DDDDEEQGGG GEEEDDFRPR YNFDQKNHHN TAYNMSIPNS LNLPNLRNFD 300 CSIMPNGRVG SSSSSGGFRF RIPSAEQQQQ RRSAPNFTYA KPKNYGAKFD ENAMPNFMPN 360 PNFTSPSSSS RFTNGGVGSS SRLRSGSGKS SGGGGSKGKR KMDPVEEMVS AVRSLGEGFM 420 RMEQMKLEMA REVEKMRMDM ELKRTEMILD SQQRIVDAFA KGFSAKKKAK KMSSPPDS

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MVWWLYGFAI VIPIHPWVAV ADPLLSLISD FSFSLSTPNN NNYPTTTQFF NNVHFTHHHL  60
PLLFQLHHHP FLSLTTTTNP NPNSSYLFIT MDMDSQNLSP LSTPNQQQKQ TTSPSSLTKP  120
SSITRRVPPP CWTHEETSAL IDSYHEKWYS LRRGNLRASH WEEVADAVAR RCNLVVPSKT  180
SVQCRHKVEK LRKRYRTEVQ KSLMTPAHHR FSSSWVFFKR MDLMEKGPSS TATGVDEDEQ  240
GGGDEEEEEE DDDDEEQGGG GEEEDDFRPR YNFDQKNHHN TAYNMSIPNS LNLPNLRNFD  300
CSIMPNGRVG SSSSSGGFRF RIPSAEQQQQ RRSAPNFTYA KPKNYGAKFD ENAMPNFMPN  360
PNFTSPSSSS RFTNGGVGSS SRLRSGSGKS SGGGGSKGKR KMDPVEEMVS AVRSLGEGFM  420
RMEQMKLEMA REVEKMRMDM ELKRTEMILD SQQRIVDAFA KGFSAKKKAK KMSSPPDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	4e-41	Trihelix family protein