PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406897.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 689aa MW: 79335.4 Da PI: 7.2177

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.5e-21	69	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GF +r+++s+++++ g +++r fvC ++g ++++k+++ +++r r++t +gC+ k+ + k+ +w v+++++eHnHel XP_026406897.1 69 EYYTNFARKSGFAIRRESSRSNQDRG-VYSRVFVCHRYGPERHRKSAKAERKRDRKTTVCGCESKMYILKKIiggVPRWSVKQFVNEHNHELL 160 69*************999996666.****************999**************9988766779***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MITSKAQTGI NCWIRKQQCP CGERKCYIRF EDGKNEEASS SSEPSEIIYV DVAPPFIGQT 60 FETDDEAFEY YTNFARKSGF AIRRESSRSN QDRGVYSRVF VCHRYGPERH RKSAKAERKR 120 DRKTTVCGCE SKMYILKKII GGVPRWSVKQ FVNEHNHELL EDDQVRLLPA YRKIPDADRE 180 RILLLHKAGC SVRHIMKVLQ VEKGEEEQLP FIERDVRNFV QSCKKVDREN DVSELLNVCK 240 SVKERDADFV YDFTMDENAK LANIAWAYGD SVCAYRAFGD VVVFDATYRE ITYDRLLGVW 300 FGIDNHGKTI FFGCVLLRDE SYHSFSWALQ AFLQFMHGRC PQTILTDIDL GLRDAITSVL 360 PSSKQVFCIW HIVSKLSSWF SFQLGPQYED FKAEFDRLYN LESKKDFEGQ WILMVNRFGL 420 GSNKHIALLF SHRASWALPY LRGHFIAQMT TAEYSKSIDA FLKGILSAQT CLESFFEQVG 480 IVSNFRTQAG EQEMEDMHIK TSMPIEEHAS SILTPYAFNL LQNEIVLSMQ CAAFETANGS 540 YLVRHHKRMD GGCLVSWMPK DEKICCSCKQ FEVSGILCRH ILRVLALKNY FHLPEKYLPI 600 RWRRESSLLQ SNTDGWSQAF HSLTSALYAE SSLSKERVDY VRKELVRVLN DVRNMSACDG 660 VVLNLECNPP IDVRIDAAAN GSECNSTWN

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MITSKAQTGI NCWIRKQQCP CGERKCYIRF EDGKNEEASS SSEPSEIIYV DVAPPFIGQT  60
FETDDEAFEY YTNFARKSGF AIRRESSRSN QDRGVYSRVF VCHRYGPERH RKSAKAERKR  120
DRKTTVCGCE SKMYILKKII GGVPRWSVKQ FVNEHNHELL EDDQVRLLPA YRKIPDADRE  180
RILLLHKAGC SVRHIMKVLQ VEKGEEEQLP FIERDVRNFV QSCKKVDREN DVSELLNVCK  240
SVKERDADFV YDFTMDENAK LANIAWAYGD SVCAYRAFGD VVVFDATYRE ITYDRLLGVW  300
FGIDNHGKTI FFGCVLLRDE SYHSFSWALQ AFLQFMHGRC PQTILTDIDL GLRDAITSVL  360
PSSKQVFCIW HIVSKLSSWF SFQLGPQYED FKAEFDRLYN LESKKDFEGQ WILMVNRFGL  420
GSNKHIALLF SHRASWALPY LRGHFIAQMT TAEYSKSIDA FLKGILSAQT CLESFFEQVG  480
IVSNFRTQAG EQEMEDMHIK TSMPIEEHAS SILTPYAFNL LQNEIVLSMQ CAAFETANGS  540
YLVRHHKRMD GGCLVSWMPK DEKICCSCKQ FEVSGILCRH ILRVLALKNY FHLPEKYLPI  600
RWRRESSLLQ SNTDGWSQAF HSLTSALYAE SSLSKERVDY VRKELVRVLN DVRNMSACDG  660
VVLNLECNPP IDVRIDAAAN GSECNSTWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein