PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406883.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 702aa MW: 80846.2 Da PI: 8.115

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.1	5.2e-17	64	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++Ak+ GF +r+++sk++ + g ++ r +vC+++g+ + +++++ +++r r+++ +gC a++ + ke +w+v+k+++ HnHel XP_026406883.1 64 EYYTNFAKRNGFAIRRESSKSNVDVG-VYIRLLVCYRSGSLRIRRSAKPDSQRGRKSSVCGCMARMYIVKEVfggIPQWCVKKFSNSHNHELL 155 69*************988885555.999********9999999999***********99998766679***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MTSSKSPNGI NCWIRRQHCP CGERKCYIRL EEEKNEEILS DFSNVNLAPP YIGQKFRTDD 60 DAFEYYTNFA KRNGFAIRRE SSKSNVDVGV YIRLLVCYRS GSLRIRRSAK PDSQRGRKSS 120 VCGCMARMYI VKEVFGGIPQ WCVKKFSNSH NHELLQDDQV RLLPAYRKIP DVYQERIFLL 180 SRYGCSVSHI MKVMQSEMGK ESGQLPFLDR DVRNFLQSSK KIDRENDLSE LLNMCKAAKV 240 KDVNFLYDFT MDDNAKVSSI AWSYGDSFRA YKVFGDLVVC DATYHEITYD RLLVVWMGVD 300 NHGKTILFGC ALLRDETSRS FKWALQAFLR FMQGRFPPVI VTDVDLGLKE AISSVLPNTK 360 HVFGLWHIVS KLPSWFSYPL GPRYDEFKSE FHRLYGLVSR KDFESQWNQM LTHFGFVSNK 420 HVSLLFSHRT SWALPYVRGY FLAQMTRTDF SKSIDALLKG ILSAQTSLES FFEQVGIAAN 480 YVRRREEKET GQILIKTSMP IEEHASSILT PYAFRLLQTE VVLSMQCAAF ETSNGVYLVR 540 HHKNVDEGCL VSWIPKDEKV NCSCKEFELS GVLCRHALKV LALKNYFHVP EKYLPFRWRY 600 ESSILEANSE DWSQTFHSLT STLYSESSIT KERISYVHEE LSRVLNYVRT MPASDEVPLS 660 LECQHMNTVV DDDSSCSGCT STGNPFQSAT DEQPLKITTV SY

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MTSSKSPNGI NCWIRRQHCP CGERKCYIRL EEEKNEEILS DFSNVNLAPP YIGQKFRTDD  60
DAFEYYTNFA KRNGFAIRRE SSKSNVDVGV YIRLLVCYRS GSLRIRRSAK PDSQRGRKSS  120
VCGCMARMYI VKEVFGGIPQ WCVKKFSNSH NHELLQDDQV RLLPAYRKIP DVYQERIFLL  180
SRYGCSVSHI MKVMQSEMGK ESGQLPFLDR DVRNFLQSSK KIDRENDLSE LLNMCKAAKV  240
KDVNFLYDFT MDDNAKVSSI AWSYGDSFRA YKVFGDLVVC DATYHEITYD RLLVVWMGVD  300
NHGKTILFGC ALLRDETSRS FKWALQAFLR FMQGRFPPVI VTDVDLGLKE AISSVLPNTK  360
HVFGLWHIVS KLPSWFSYPL GPRYDEFKSE FHRLYGLVSR KDFESQWNQM LTHFGFVSNK  420
HVSLLFSHRT SWALPYVRGY FLAQMTRTDF SKSIDALLKG ILSAQTSLES FFEQVGIAAN  480
YVRRREEKET GQILIKTSMP IEEHASSILT PYAFRLLQTE VVLSMQCAAF ETSNGVYLVR  540
HHKNVDEGCL VSWIPKDEKV NCSCKEFELS GVLCRHALKV LALKNYFHVP EKYLPFRWRY  600
ESSILEANSE DWSQTFHSLT STLYSESSIT KERISYVHEE LSRVLNYVRT MPASDEVPLS  660
LECQHMNTVV DDDSSCSGCT STGNPFQSAT DEQPLKITTV SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein