PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406494.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 700aa MW: 75456.1 Da PI: 9.547

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.5	1e-29	94	178	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+ aL+++r++m+ ++r++ lk+plWe+vs+k++e gf rs+k+Ckek+en++k+yk++keg+ +r++++s +++f+qlea XP_026406494.1 94 RWPRQETIALLKIRSDMDAAFRDATLKGPLWEDVSRKLAELGFIRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFTQLEA 178 8*******************************************************************866665..*****85 PP
2	trihelix	107.3	1.1e-33	525	610	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +e+r++++ k+plWee+s+ m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf+ql+a XP_026406494.1 525 RWPKTEVLALIKLRSGLESRYQEAGPKGPLWEEISAGMGKMGYSRSAKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHQLDA 610 8*******************************************************************8.99999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MQQGGPQYGV SPEMSNNPAD HHLQQQQRQH KSLSVDATVV TAEAASPISC RPPASGSFEE 60 LVGAPGSGGG RFQDEDGFGG EETERGSAGG GGNRWPRQET IALLKIRSDM DAAFRDATLK 120 GPLWEDVSRK LAELGFIRSA KKCKEKFENV HKYYKRTKEG RAGRQDGKSY RFFTQLEALH 180 GTTTTTTTAT PTHSLPPLPI TSATTTNQGV SPLPMGIGMV GSATSGRIQP PPSDSAAIPT 240 AQIGVPRSDY QTPPPQPPTT GISGSSAAAA VAAGISFSSN TSSSSGDSDS DEDLDEGGGP 300 SSNPTDTRKR KRGGSGGVSV GGSTSHRMMH FFEGLMKQVM EKQEAMQQRF LETIEKREQD 360 RMIREEAWKR QEMARLTREH EMMAQERAIS ASRDAAVIAF LQKITGQTIQ LPSPGIIPAA 420 PPPAPVQAPP PTPQPQSIPP PTAPTPSPPP PPPSQPKQQK QHQHHQIVRH QPQQQPPPQS 480 QSSEVIITHH HQPTSADHVI IAVPEQQHPP AQEMGSGGFD SASSRWPKTE VLALIKLRSG 540 LESRYQEAGP KGPLWEEISA GMGKMGYSRS AKRCKEKWEN INKYFKKVKE SNKKRPEDAK 600 TCPYFHQLDA LYRKKVHGGS NQTKQESPID HNQSSNTSSS SMDPNQSSTT LQQAIMAPPP 660 PPPQTNANES AAETNVKNNN NVGGGSNVEG AASVAKKKTL

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MQQGGPQYGV SPEMSNNPAD HHLQQQQRQH KSLSVDATVV TAEAASPISC RPPASGSFEE  60
LVGAPGSGGG RFQDEDGFGG EETERGSAGG GGNRWPRQET IALLKIRSDM DAAFRDATLK  120
GPLWEDVSRK LAELGFIRSA KKCKEKFENV HKYYKRTKEG RAGRQDGKSY RFFTQLEALH  180
GTTTTTTTAT PTHSLPPLPI TSATTTNQGV SPLPMGIGMV GSATSGRIQP PPSDSAAIPT  240
AQIGVPRSDY QTPPPQPPTT GISGSSAAAA VAAGISFSSN TSSSSGDSDS DEDLDEGGGP  300
SSNPTDTRKR KRGGSGGVSV GGSTSHRMMH FFEGLMKQVM EKQEAMQQRF LETIEKREQD  360
RMIREEAWKR QEMARLTREH EMMAQERAIS ASRDAAVIAF LQKITGQTIQ LPSPGIIPAA  420
PPPAPVQAPP PTPQPQSIPP PTAPTPSPPP PPPSQPKQQK QHQHHQIVRH QPQQQPPPQS  480
QSSEVIITHH HQPTSADHVI IAVPEQQHPP AQEMGSGGFD SASSRWPKTE VLALIKLRSG  540
LESRYQEAGP KGPLWEEISA GMGKMGYSRS AKRCKEKWEN INKYFKKVKE SNKKRPEDAK  600
TCPYFHQLDA LYRKKVHGGS NQTKQESPID HNQSSNTSSS SMDPNQSSTT LQQAIMAPPP  660
PPPQTNANES AAETNVKNNN NVGGGSNVEG AASVAKKKTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	4e-48	Trihelix family protein