PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405810.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 452aa MW: 53201.1 Da PI: 9.8791

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.6	2.3e-09	2	34	59	90
FAR1 59 rtgCkaklkvkkek.dgkwevtkleleHnHela 90 rt+Cka++++ ++ ++ w+v+++++eHnHe++ XP_026405810.1 2 RTDCKAMMRIALDIkRKMWYVNTFVHEHNHEMV 34 89********9889*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MRTDCKAMMR IALDIKRKMW YVNTFVHEHN HEMVSPKKRA LMRSNKYMPL EAKSMAEAFN 60 KNRLPVVQVD GEGRAANLFW VDARSRMAYI RFGDVVTFDT TYKTNKYSMP FAPFTGKNHH 120 HQSITFGFAL LGDETEPTFI WLFKTWLEAM GGTPPVSILT DQDQAMTNAV ATVFPGTRHR 180 FCLWHIKKKF GEKLSHVLFK KSKFKRTVKA VIRNTYTVED FVNQWQSMLV EFSLTENEWL 240 KDLYDIREKW IPVYNRSVLF FAGMNTTQRS ESINSFFDHY VNSKTSLREF AESCDQAFER 300 MYVREREEDY KSIHTKRIFA SQDLLVRHAS KIFTRVIFNK VHAEFNASLR YRSKIVEVDG 360 DEHSYTVYWK VGDTVEQFPV KINEVTKKGT CGRQNFEFKG IPCRHLHHIL VSRLYVEEIP 420 SYFVMERWKK NANKSVVLSS DHLEIKDDKV GI

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MRTDCKAMMR IALDIKRKMW YVNTFVHEHN HEMVSPKKRA LMRSNKYMPL EAKSMAEAFN  60
KNRLPVVQVD GEGRAANLFW VDARSRMAYI RFGDVVTFDT TYKTNKYSMP FAPFTGKNHH  120
HQSITFGFAL LGDETEPTFI WLFKTWLEAM GGTPPVSILT DQDQAMTNAV ATVFPGTRHR  180
FCLWHIKKKF GEKLSHVLFK KSKFKRTVKA VIRNTYTVED FVNQWQSMLV EFSLTENEWL  240
KDLYDIREKW IPVYNRSVLF FAGMNTTQRS ESINSFFDHY VNSKTSLREF AESCDQAFER  300
MYVREREEDY KSIHTKRIFA SQDLLVRHAS KIFTRVIFNK VHAEFNASLR YRSKIVEVDG  360
DEHSYTVYWK VGDTVEQFPV KINEVTKKGT CGRQNFEFKG IPCRHLHHIL VSRLYVEEIP  420
SYFVMERWKK NANKSVVLSS DHLEIKDDKV GI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein