PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405809.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 455aa MW: 53812.9 Da PI: 10.1078

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.6	2.3e-09	2	34	59	90
FAR1 59 rtgCkaklkvkkek.dgkwevtkleleHnHela 90 rt+Cka++++ ++ ++ w+v+++++eHnHe++ XP_026405809.1 2 RTDCKAMMRIALDIkRKMWYVNTFVHEHNHEMV 34 89********9889*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MRTDCKAMMR IALDIKRKMW YVNTFVHEHN HEMVSPKKRA LMRSNKYMPL EAKSMAEAFN 60 KNRLPVGKVV SLFGQTENTT FIPRDVYNHL RTVRKSLLDV GDAEAVVKYF RKRIIENSSF 120 YYAVQVDGEG RAANLFWVDA RSRMAYIRFG DVVTFDTTYK TNKYSMPFAP FTVATVFPGT 180 RHRFCLWHIK KKFGEKLSHV LFKKSKFKRT VKAVIRNTYT VEDFVNQWQS MLVEFSLTEN 240 EWLKDLYDIR EKWIPVYNRS VLFFAGMNTT QRSESINSFF DHYVNSKTSL REFAESCDQA 300 FERMYVRERE EDYKSIHTKR IFASQDLLVR HASKIFTRVI FNKVHAEFNA SLRYRSKIVE 360 VDGDEHSYTV YWKVGDTVEQ FPVKINEVTK KGTCGRQNFE FKGIPCRHLH HILVSRLYVE 420 EIPSYFVMER WKKNANKSVV LSSDHLEIKD DKVGI

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MRTDCKAMMR IALDIKRKMW YVNTFVHEHN HEMVSPKKRA LMRSNKYMPL EAKSMAEAFN  60
KNRLPVGKVV SLFGQTENTT FIPRDVYNHL RTVRKSLLDV GDAEAVVKYF RKRIIENSSF  120
YYAVQVDGEG RAANLFWVDA RSRMAYIRFG DVVTFDTTYK TNKYSMPFAP FTVATVFPGT  180
RHRFCLWHIK KKFGEKLSHV LFKKSKFKRT VKAVIRNTYT VEDFVNQWQS MLVEFSLTEN  240
EWLKDLYDIR EKWIPVYNRS VLFFAGMNTT QRSESINSFF DHYVNSKTSL REFAESCDQA  300
FERMYVRERE EDYKSIHTKR IFASQDLLVR HASKIFTRVI FNKVHAEFNA SLRYRSKIVE  360
VDGDEHSYTV YWKVGDTVEQ FPVKINEVTK KGTCGRQNFE FKGIPCRHLH HILVSRLYVE  420
EIPSYFVMER WKKNANKSVV LSSDHLEIKD DKVGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-87	FAR1 family protein