PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405808.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 509aa MW: 59796.7 Da PI: 9.9281

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.4	2.6e-09	2	34	59	90
FAR1 59 rtgCkaklkvkkek.dgkwevtkleleHnHela 90 rt+Cka++++ ++ ++ w+v+++++eHnHe++ XP_026405808.1 2 RTDCKAMMRIALDIkRKMWYVNTFVHEHNHEMV 34 89********9889*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MRTDCKAMMR IALDIKRKMW YVNTFVHEHN HEMVSPKKRA LMRSNKYMPL EAKSMAEAFN 60 KNRLPVGKVV SLFGQTENTT FIPRDVYNHL RTVRKSLLDV GDAEAVVKYF RKRIIENSSF 120 YYAVQVDGEG RAANLFWVDA RSRMAYIRFG DVVTFDTTYK TNKYSMPFAP FTGKNHHHQS 180 ITFGFALLGD ETEPTFIWLF KTWLEAMGGT PPVSILTDQD QAMTNAVATV FPGTRHRFCL 240 WHIKKKFGEK LSHVLFKKSK FKRTVKAVIR NTYTVEDFVN QWQSMLVEFS LTENEWLKDL 300 YDIREKWIPV YNRSVLFFAG MNTTQRSESI NSFFDHYVNS KTSLREFAES CDQAFERMYV 360 REREEDYKSI HTKRIFASQD LLVRHASKIF TRVIFNKVHA EFNASLRYRS KIVEVDGDEH 420 SYTVYWKVGD TVEQFPVKIN EVTKKGTCGR QNFEFKGIPC RHLHHILVSR LYVEEIPSYF 480 VMERWKKNAN KSVVLSSDHL EIKDDKVGI

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MRTDCKAMMR IALDIKRKMW YVNTFVHEHN HEMVSPKKRA LMRSNKYMPL EAKSMAEAFN  60
KNRLPVGKVV SLFGQTENTT FIPRDVYNHL RTVRKSLLDV GDAEAVVKYF RKRIIENSSF  120
YYAVQVDGEG RAANLFWVDA RSRMAYIRFG DVVTFDTTYK TNKYSMPFAP FTGKNHHHQS  180
ITFGFALLGD ETEPTFIWLF KTWLEAMGGT PPVSILTDQD QAMTNAVATV FPGTRHRFCL  240
WHIKKKFGEK LSHVLFKKSK FKRTVKAVIR NTYTVEDFVN QWQSMLVEFS LTENEWLKDL  300
YDIREKWIPV YNRSVLFFAG MNTTQRSESI NSFFDHYVNS KTSLREFAES CDQAFERMYV  360
REREEDYKSI HTKRIFASQD LLVRHASKIF TRVIFNKVHA EFNASLRYRS KIVEVDGDEH  420
SYTVYWKVGD TVEQFPVKIN EVTKKGTCGR QNFEFKGIPC RHLHHILVSR LYVEEIPSYF  480
VMERWKKNAN KSVVLSSDHL EIKDDKVGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein