PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405195.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 893aa MW: 102237 Da PI: 8.3669

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.6	4.3e-23	75	160	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Yne A+++GFsvr++k k+ ng + kr fvC k+g r+++++ + r++r++ rtgC a++++k ek++kw+vt++ eHnH+l XP_026405195.1 75 TYNEVARRAGFSVRRDKLVKR-ANGMMRKRVFVCFKQGIRKKDNRY-QYVRKERPQIRTGCMARMVIKYEKENKWVVTDIICEHNHPL 160 69*************9997.9999*************999.999**********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MDTSGRSSNN RCSGYSPGNL EETVEQTIRG DIGQTLNGNQ GELDKSNDVE VDLNKLEDLI 60 YEGMVFESEE RAFDTYNEVA RRAGFSVRRD KLVKRANGMM RKRVFVCFKQ GIRKKDNRYQ 120 YVRKERPQIR TGCMARMVIK YEKENKWVVT DIICEHNHPL PTTSKSYRLR PQRRTADAAT 180 NDLEGIDTVG ISPADGSKQI NGRQAEGHES VGNKLATLGN HIQSKRKILE KDEARTLLDY 240 FTRKKMENPA FFYSMIVDKE NQVTNLFWAD ARSIMDYNYF GDVVIFDTTY RTNLHGWPFA 300 PFVGVNHHKQ TVLFGGALIL DESTESFIWL FETWMKMMSG RQPKTIITDH CATISKAISI 360 VMTETHHRIC LWHIFKNASK HLSHVYWMPG FLQCFSKCIY GYETEEEFIA RWEKMLHDYK 420 LAGTKWLDDL FNVREKWALV YGHDTFCADT TTTQHNKSIN KFLKKFVKKK YSFTEFLARY 480 ERVLSAWRER ELHEDFESIQ TSPNLPFPAP MLKQAADKYT RAVFKMFAEE YKEWILCKVE 540 DCGEDGIFCK YEVTQENRAK GLVTIDPSTC QVLCSCKKFE FVGILCRHAI KILYHRNIHD 600 LPPHYILKRW SKDAKSGTVR DREGNQMQAD SSSLISLRYN ELLQKAINIV TKGSLNEESH 660 LVASRALDNA LLEVESATKA TQGGSGDDFD TSLATQFHSG ERVFVGEGGD KSIMFSARQI 720 NGDLDVGQKR RKTRNSFVDL SHELSMDNPH HQQGQNHRLP DGLKRNDSPI YPSLQIVSTP 780 NSTPLPYTPV SLTESTQFIY PIIRPNLQYV SSPYTQGSSG LGMEPCPFIT HSAPEGSYIS 840 NKPHNLGSTY SKPTTANTGF KPHQASFGEP RIPATFYPQP SSFPTRFESN QIL

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MDTSGRSSNN RCSGYSPGNL EETVEQTIRG DIGQTLNGNQ GELDKSNDVE VDLNKLEDLI  60
YEGMVFESEE RAFDTYNEVA RRAGFSVRRD KLVKRANGMM RKRVFVCFKQ GIRKKDNRYQ  120
YVRKERPQIR TGCMARMVIK YEKENKWVVT DIICEHNHPL PTTSKSYRLR PQRRTADAAT  180
NDLEGIDTVG ISPADGSKQI NGRQAEGHES VGNKLATLGN HIQSKRKILE KDEARTLLDY  240
FTRKKMENPA FFYSMIVDKE NQVTNLFWAD ARSIMDYNYF GDVVIFDTTY RTNLHGWPFA  300
PFVGVNHHKQ TVLFGGALIL DESTESFIWL FETWMKMMSG RQPKTIITDH CATISKAISI  360
VMTETHHRIC LWHIFKNASK HLSHVYWMPG FLQCFSKCIY GYETEEEFIA RWEKMLHDYK  420
LAGTKWLDDL FNVREKWALV YGHDTFCADT TTTQHNKSIN KFLKKFVKKK YSFTEFLARY  480
ERVLSAWRER ELHEDFESIQ TSPNLPFPAP MLKQAADKYT RAVFKMFAEE YKEWILCKVE  540
DCGEDGIFCK YEVTQENRAK GLVTIDPSTC QVLCSCKKFE FVGILCRHAI KILYHRNIHD  600
LPPHYILKRW SKDAKSGTVR DREGNQMQAD SSSLISLRYN ELLQKAINIV TKGSLNEESH  660
LVASRALDNA LLEVESATKA TQGGSGDDFD TSLATQFHSG ERVFVGEGGD KSIMFSARQI  720
NGDLDVGQKR RKTRNSFVDL SHELSMDNPH HQQGQNHRLP DGLKRNDSPI YPSLQIVSTP  780
NSTPLPYTPV SLTESTQFIY PIIRPNLQYV SSPYTQGSSG LGMEPCPFIT HSAPEGSYIS  840
NKPHNLGSTY SKPTTANTGF KPHQASFGEP RIPATFYPQP SSFPTRFESN QIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-128	FAR1 family protein