PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404664.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 408aa MW: 46733.5 Da PI: 4.0668

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.7	6.1e-13	170	256	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkik.egekkrtsessstcpyfdqle 86 Wt++ + +L++ ++ +l+r++l+ W ev+kk+ + r+ +qC+++++ l+k+ykk+k ++e+ ++++ss +++yf++++ XP_026404664.1 170 WTEHATFVLLDTWGDKFLQLGRKSLRLDEWIEVAKKVsLLSNVVRTDTQCRNRLDTLKKKYKKEKlKIEETGNNNSSCKWVYFKKMD 256 ***********************************667789*****************94455566899999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MDRGEMNDAE EEASYPYDEQ EGDEYEEGGD DGEEEVEEED EGEEMEVVGE EEEEEEENVV 60 QRVKEEVEEV DEQEQLQQDH AGADDDDYEE EDEDDTDDDD DEDDNVDGGG NDNGMDDDED 120 SERNGKKRKL KDLSLSYEFA PRVVVPQPSA IAMSVPKSSY GGRKNAAADW TEHATFVLLD 180 TWGDKFLQLG RKSLRLDEWI EVAKKVSLLS NVVRTDTQCR NRLDTLKKKY KKEKLKIEET 240 GNNNSSCKWV YFKKMDMLMN VSPRQPGLAC GMDSREYVFT NPRVYLSHSN GLDEMRDSPG 300 NSESTEADDD NSDGLPPKKA RYVENGVERS SFRLLADSIK KFGDIHAKIE NSKRQQMLEL 360 EKMRMEFHRD LELHRRKILE RAQAEIAKMR DEDDEEFGGS ASTGDMSD

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MDRGEMNDAE EEASYPYDEQ EGDEYEEGGD DGEEEVEEED EGEEMEVVGE EEEEEEENVV  60
QRVKEEVEEV DEQEQLQQDH AGADDDDYEE EDEDDTDDDD DEDDNVDGGG NDNGMDDDED  120
SERNGKKRKL KDLSLSYEFA PRVVVPQPSA IAMSVPKSSY GGRKNAAADW TEHATFVLLD  180
TWGDKFLQLG RKSLRLDEWI EVAKKVSLLS NVVRTDTQCR NRLDTLKKKY KKEKLKIEET  240
GNNNSSCKWV YFKKMDMLMN VSPRQPGLAC GMDSREYVFT NPRVYLSHSN GLDEMRDSPG  300
NSESTEADDD NSDGLPPKKA RYVENGVERS SFRLLADSIK KFGDIHAKIE NSKRQQMLEL  360
EKMRMEFHRD LELHRRKILE RAQAEIAKMR DEDDEEFGGS ASTGDMSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-64	Trihelix family protein