PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404289.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 780aa MW: 88825.1 Da PI: 6.1506

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	95.4	6.7e-30	82	172	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Yn+YA++vGFs+r+s+ ++s++++ i++r+ vCs++g+++ ++++ ++k++r+ra+ r+gCka+++vkk+++gkw v+k+ +eHnHel+p XP_026404289.1 82 CYNSYARRVGFSTRVSTYHRSRHDDAIICRQIVCSRQGFHQGRDRNsKRKQKRPRAVARVGCKAMIMVKKKDTGKWIVSKITKEHNHELVP 172 6**************************************9998856778889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MEFEPLNNMD MEFDIGSGEE NDDLDISNNG IDLEQDVDYD NGEFLDGGDL FGDIVPVTTD 60 TDADLEPYEG MEFESEEAAR ICYNSYARRV GFSTRVSTYH RSRHDDAIIC RQIVCSRQGF 120 HQGRDRNSKR KQKRPRAVAR VGCKAMIMVK KKDTGKWIVS KITKEHNHEL VPHDKVHSLR 180 SHKHISGSAR SLIDTLQAAG IGPSGVMSVL IKESGGVDNV GFSTVDYRNY LTSRQRHFGG 240 GAQQVLDYLK QMQAEDPTFF YEIQGDSDHS AGNIFWTDAT CRMNYNCFGD TVIFDTVYRT 300 NRYRVPFAPF TGWNHHGQPV LFGWALLLNE SESSFIWLFQ TWLAQMSGRH PISITTDQDR 360 VIEAAVTHVF PDTRHRFCKW NIFREAQDKL SGVCQSHPNF EIEFRKCINT TESIEEFESS 420 WQLLLQRYDL MENEWLQSMY NARLQWVPVY LCDTFFAEMS VTQGSDSINS FFDGYVNAST 480 TVQVLVKQYE KAIASRHEKE VKADYDTLNT APVLKTPSPM EKQAANIYTR RIFIKFQEEL 540 VETLASTATK IEDSGTVTVC RVVKFGEEHK AYIVRFHVFE MLANCSCQML EFSGILCKHI 600 LAVFRVTNVL TLPSHYVLRR WTRNAKSGVV VDDHALELQS TSKESSIDRF NNLRHEVIKY 660 VDEGAKSSQT YNVAMDALKE AIKKVKTSKK HGSGAAPLGN LPNGSNGEVC SAEGNRLGQL 720 QSCSADEKEK KIEELVNELE CANERCEVYR ENLLAVLKDM EEQKLKLSVK VQNVRLSLKD

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MEFEPLNNMD MEFDIGSGEE NDDLDISNNG IDLEQDVDYD NGEFLDGGDL FGDIVPVTTD  60
TDADLEPYEG MEFESEEAAR ICYNSYARRV GFSTRVSTYH RSRHDDAIIC RQIVCSRQGF  120
HQGRDRNSKR KQKRPRAVAR VGCKAMIMVK KKDTGKWIVS KITKEHNHEL VPHDKVHSLR  180
SHKHISGSAR SLIDTLQAAG IGPSGVMSVL IKESGGVDNV GFSTVDYRNY LTSRQRHFGG  240
GAQQVLDYLK QMQAEDPTFF YEIQGDSDHS AGNIFWTDAT CRMNYNCFGD TVIFDTVYRT  300
NRYRVPFAPF TGWNHHGQPV LFGWALLLNE SESSFIWLFQ TWLAQMSGRH PISITTDQDR  360
VIEAAVTHVF PDTRHRFCKW NIFREAQDKL SGVCQSHPNF EIEFRKCINT TESIEEFESS  420
WQLLLQRYDL MENEWLQSMY NARLQWVPVY LCDTFFAEMS VTQGSDSINS FFDGYVNAST  480
TVQVLVKQYE KAIASRHEKE VKADYDTLNT APVLKTPSPM EKQAANIYTR RIFIKFQEEL  540
VETLASTATK IEDSGTVTVC RVVKFGEEHK AYIVRFHVFE MLANCSCQML EFSGILCKHI  600
LAVFRVTNVL TLPSHYVLRR WTRNAKSGVV VDDHALELQS TSKESSIDRF NNLRHEVIKY  660
VDEGAKSSQT YNVAMDALKE AIKKVKTSKK HGSGAAPLGN LPNGSNGEVC SAEGNRLGQL  720
QSCSADEKEK KIEELVNELE CANERCEVYR ENLLAVLKDM EEQKLKLSVK VQNVRLSLKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein