PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404201.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 1596aa MW: 180585 Da PI: 5.3127

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00061	1504	1526	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ CgksF ++ +L++H r+H XP_026404201.1 1504 CSvkGCGKSFFSHKYLMQHRRVH 1526 77779****************99 PP
2	zf-C2H2	14.1	0.00014	1562	1586	1	23
EEETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt..H 23 y+C dC++sF+ s++ rH r+ H XP_026404201.1 1562 YQCRDCNQSFRFVSDFSRHKRKtgH 1586 9*******************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1596 aa Download sequence
MATSSVAAES EVPLWLRNLP LAPEYHPTLE EFQDPISYIL KIEKDASKYG ICKIIPPISS 60 PPKKTAITQL NRSLSARNPN SVSKTLPTFT TRHQQIGFCP RKPRPVQKPV WQSGEAYTVQ 120 QFEAKAKAFE RSYLKKSAKK KVFSELEIEA LFWKASRDKP FTVEYANDMP GSAFVPINEK 180 KWRESGIPTT VGETVWNMRG VSRHKESLLR FMKEDIPGVT SPMVYLAMLF SWFAWHVEDH 240 DLHSLNYLHM GAGKTWYGVP KDAAVAFEEV IRVHGYGGEV NPLVTFATLX ERTTVLSPEV 300 LIGGIPCCGD LFLTANLAGV FVVTFPRAYH SGFSHGQIQF GEAANIATPE WLTVANEAAI 360 RRASINCPPM VSHLQLLYTL SLSLCPSVPR NISSDEPRSS RLKNKKRSEG QTMIKELFVQ 420 NMIQNNNLIH LLIEQGASCV LLPQSSLETF ECSNLGVGSQ VKVKPRLSLG LCTNKESLEA 480 SKTSLSNMDR NMGVRPYNGV XSLKGKSNLE LGGNRLSSSS LSRNGSYENT NLFTPTSVIG 540 NPNKTSTSQS LGIEQGLFTC VTCGVLTFGC AAVIQPSDVA ARYLRSADCG FFNEWAVGSG 600 DRYPVAEEVD DTPEADHPSG QTEKSDHDGL HNVDLVPERV KSALDTGTNK DVTSLDLLAF 660 AYGNSSDSED DNANDRGDCS LFHQHSEFLS NGFGSHSLEH DSVDATVESS SYLSRRQGYG 720 TDRFIKTYQR TKVSDRKQKQ RSHDADIKGV EAPHIFSGNN TRELVHGESI GDKDSCRNTT 780 LTGYVESHQG VLSNSSTRHC LSEPSKSTNA ELPLKNSNMQ IVQSSDVDST RKHIFCLEHA 840 VEVENQLRPI GGVHMLLICN PEYSQIQVEA KSLSEEMGVK KHWNAIPFIE ASKDDIERTQ 900 SALYDEEAIA GNGDWSVKLG VNLYYSVSLS QSPIYSKQMP YNPVIYKAFG RSSPAFNSPT 960 DPEFSTKGSG KQKKIFVAGR WCGKVWMSNQ VHPYLVDRQT QEDYPMTFHS HTVREFKLEG 1020 TPNMAHLTEQ LLVPKKNSSP HARTPAIVNR KPTRKRKNTS EKPATKRHQS SQLDNRLVEA 1080 EVEIEEEDEP AAEELSPESD SPPLRERLLR SGGRTKREAA RHLSSTLRGG RHYSSNMYIK 1140 DHIDDEDEVA AEESSPESDY PLLQERLLRN GGRMKDDTED EDEDEDEATA IEFSPESDLP 1200 LLPERPHRSG GRMKHETPRH LSSTLRGDRR YDSNMSTKDE IEGGYSSRLG RTPRKRFVAE 1260 EEEEEEEELV VVEEEEEEEE NNVPSARPRR TTSWKHVVAE EEEEEEEEEE EEEEEEEEEE 1320 EEEEEEEEEE EEEEEEEEEE NNIPSAQPRR RAPWRSVIAE EEEEEEEEEE EEEEEEEDNT 1380 PSKRLRGKTS WRPVVAEEEE EEEYNIPSKR PRRRTSWKPV IAEEEEEDDN LVVVRGKGKR 1440 RVKGKVKIEE EKQPMRRARK VSYASSRNKL PLEDAEGEYH CNVEGCTMGF SSKQELSLHK 1500 KNMCSVKGCG KSFFSHKYLM QHRRVHSDDR PLKCPVRGCM MTFKWPWSRT EHIRVHTGDR 1560 PYQCRDCNQS FRFVSDFSRH KRKTGHSVKK GRGGKK

Sequence ? help Back to Top

Protein Sequence Length: 1596 aa Download sequence

MATSSVAAES EVPLWLRNLP LAPEYHPTLE EFQDPISYIL KIEKDASKYG ICKIIPPISS  60
PPKKTAITQL NRSLSARNPN SVSKTLPTFT TRHQQIGFCP RKPRPVQKPV WQSGEAYTVQ  120
QFEAKAKAFE RSYLKKSAKK KVFSELEIEA LFWKASRDKP FTVEYANDMP GSAFVPINEK  180
KWRESGIPTT VGETVWNMRG VSRHKESLLR FMKEDIPGVT SPMVYLAMLF SWFAWHVEDH  240
DLHSLNYLHM GAGKTWYGVP KDAAVAFEEV IRVHGYGGEV NPLVTFATLX ERTTVLSPEV  300
LIGGIPCCGD LFLTANLAGV FVVTFPRAYH SGFSHGQIQF GEAANIATPE WLTVANEAAI  360
RRASINCPPM VSHLQLLYTL SLSLCPSVPR NISSDEPRSS RLKNKKRSEG QTMIKELFVQ  420
NMIQNNNLIH LLIEQGASCV LLPQSSLETF ECSNLGVGSQ VKVKPRLSLG LCTNKESLEA  480
SKTSLSNMDR NMGVRPYNGV XSLKGKSNLE LGGNRLSSSS LSRNGSYENT NLFTPTSVIG  540
NPNKTSTSQS LGIEQGLFTC VTCGVLTFGC AAVIQPSDVA ARYLRSADCG FFNEWAVGSG  600
DRYPVAEEVD DTPEADHPSG QTEKSDHDGL HNVDLVPERV KSALDTGTNK DVTSLDLLAF  660
AYGNSSDSED DNANDRGDCS LFHQHSEFLS NGFGSHSLEH DSVDATVESS SYLSRRQGYG  720
TDRFIKTYQR TKVSDRKQKQ RSHDADIKGV EAPHIFSGNN TRELVHGESI GDKDSCRNTT  780
LTGYVESHQG VLSNSSTRHC LSEPSKSTNA ELPLKNSNMQ IVQSSDVDST RKHIFCLEHA  840
VEVENQLRPI GGVHMLLICN PEYSQIQVEA KSLSEEMGVK KHWNAIPFIE ASKDDIERTQ  900
SALYDEEAIA GNGDWSVKLG VNLYYSVSLS QSPIYSKQMP YNPVIYKAFG RSSPAFNSPT  960
DPEFSTKGSG KQKKIFVAGR WCGKVWMSNQ VHPYLVDRQT QEDYPMTFHS HTVREFKLEG  1020
TPNMAHLTEQ LLVPKKNSSP HARTPAIVNR KPTRKRKNTS EKPATKRHQS SQLDNRLVEA  1080
EVEIEEEDEP AAEELSPESD SPPLRERLLR SGGRTKREAA RHLSSTLRGG RHYSSNMYIK  1140
DHIDDEDEVA AEESSPESDY PLLQERLLRN GGRMKDDTED EDEDEDEATA IEFSPESDLP  1200
LLPERPHRSG GRMKHETPRH LSSTLRGDRR YDSNMSTKDE IEGGYSSRLG RTPRKRFVAE  1260
EEEEEEEELV VVEEEEEEEE NNVPSARPRR TTSWKHVVAE EEEEEEEEEE EEEEEEEEEE  1320
EEEEEEEEEE EEEEEEEEEE NNIPSAQPRR RAPWRSVIAE EEEEEEEEEE EEEEEEEDNT  1380
PSKRLRGKTS WRPVVAEEEE EEEYNIPSKR PRRRTSWKPV IAEEEEEDDN LVVVRGKGKR  1440
RVKGKVKIEE EKQPMRRARK VSYASSRNKL PLEDAEGEYH CNVEGCTMGF SSKQELSLHK  1500
KNMCSVKGCG KSFFSHKYLM QHRRVHSDDR PLKCPVRGCM MTFKWPWSRT EHIRVHTGDR  1560
PYQCRDCNQS FRFVSDFSRH KRKTGHSVKK GRGGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein