PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026404185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 209aa MW: 23767.2 Da PI: 7.7897 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.2 | 3.7e-40 | 6 | 105 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk lrr+Ca+dCvlapyfp+++p++f vhk+FGasn++k+l++lp ++r++a++++ eA +r++dPvyG+vg+i++lqqq+ +++ela XP_026404185.1 6 RCAACKSLRRRCAEDCVLAPYFPSTNPQRFSSVHKIFGASNITKMLQRLPVSQRSEAADCMSLEATWRVQDPVYGCVGIISQLQQQILMVQSELA 100 6********************************************************************************************** PP DUF260 96 llkee 100 +++ e XP_026404185.1 101 KTQGE 105 99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MSNSTRCAAC KSLRRRCAED CVLAPYFPST NPQRFSSVHK IFGASNITKM LQRLPVSQRS 60 EAADCMSLEA TWRVQDPVYG CVGIISQLQQ QILMVQSELA KTQGEIAFHN AQQQQQQTQL 120 PQEPIVGGTQ SLFQFGQPSS SSTNINVNQE DMISSNLDQQ PFLDFLNQQR LLFPSSTHIC 180 GHHFLLFVDY VLLFLLKHLF FIFFFILTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26620.1 | 7e-45 | LBD family protein |