PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404059.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 487aa MW: 54684.4 Da PI: 7.3704

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.5	5e-40	208	285	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+++l++ak+yhrrhkvCe+hska++v++ g+eqrfCqqCsrfh l efDe+krsCr+rLa+hn+rrrk+++ XP_026404059.1 208 RCQAEGCNVELTHAKHYHRRHKVCEFHSKATKVVAGGIEQRFCQQCSRFHVLAEFDESKRSCRKRLADHNRRRRKPHQ 285 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MMNKYISNGD GDNEICNTNN PSMVSFVGLD TNNQKHFGEW ETNNISSHHQ QHRHHQPTAT 60 NNNNNHNTVN PNFLNSSSTT NNNIFENFNN NFLSTTPHSS TLFPSNNFFS PTSSSSTYNN 120 NNNSTQFLDF PPSSSTSTNF FLKNKPQLNS SSSFDGSGLY YNSINNDYRR IGLNLGHRTY 180 FSSRESTMML DRLVRRPRGF YLENQVPRCQ AEGCNVELTH AKHYHRRHKV CEFHSKATKV 240 VAGGIEQRFC QQCSRFHVLA EFDESKRSCR KRLADHNRRR RKPHQPSGPY NETSSSSSAV 300 KPVASENETG NLQMGSSSSR SLSELVAAQD HNSNQQQDMS LSSSSATLSL MIPKCTTTTN 360 NNNHKSIPTT KAADTSSLMT HFISNSCSPP SSGPHHSPHE HNPSQPFIST EANSPSAVSL 420 SSYQNLFFPN VNSNERHHRV EDDHEEELTL QQSAADQHGA STTSEIDHED LHNLLHLRQA 480 MFGVEFV

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MMNKYISNGD GDNEICNTNN PSMVSFVGLD TNNQKHFGEW ETNNISSHHQ QHRHHQPTAT  60
NNNNNHNTVN PNFLNSSSTT NNNIFENFNN NFLSTTPHSS TLFPSNNFFS PTSSSSTYNN  120
NNNSTQFLDF PPSSSTSTNF FLKNKPQLNS SSSFDGSGLY YNSINNDYRR IGLNLGHRTY  180
FSSRESTMML DRLVRRPRGF YLENQVPRCQ AEGCNVELTH AKHYHRRHKV CEFHSKATKV  240
VAGGIEQRFC QQCSRFHVLA EFDESKRSCR KRLADHNRRR RKPHQPSGPY NETSSSSSAV  300
KPVASENETG NLQMGSSSSR SLSELVAAQD HNSNQQQDMS LSSSSATLSL MIPKCTTTTN  360
NNNHKSIPTT KAADTSSLMT HFISNSCSPP SSGPHHSPHE HNPSQPFIST EANSPSAVSL  420
SSYQNLFFPN VNSNERHHRV EDDHEEELTL QQSAADQHGA STTSEIDHED LHNLLHLRQA  480
MFGVEFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	283	KRSCRKRLADHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	2e-52	SBP family protein