PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403857.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 396aa    MW: 44162.3 Da    PI: 6.7749
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.00187189220
                    EETTTTEEESSHHHHHHHH CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHi 20
                    +C++Cgk  ++ ++Lk H+
  XP_026403857.1 71 RCNYCGKEINSYHLLKYHL 89
                    7*****************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MATNEVNVCI LDHSTIMAPC VNIPEDVKVQ SGSSSRKKIA YVNNSRQGKN EAVVGFHDHG  60
TLVDGVEKRV RCNYCGKEIN SYHLLKYHLG GMHEFVLPCV KVPEDVKVHM RNSLLPETKK  120
PDEHREVLQL SESSSSWKRD SSSDDSAPDE VSIDIQDHCT LLDKKKDWVR CNYCAKEICS  180
YTLLKKHLGG IRGTISPCVE VPEDIKVQIK KYSLPALLRK RKPSVIMEYS GSEQKDEKLQ  240
VLPNPEKKNK VKNKEDAEDV SSKQTQRCIG RFFIENGIDF SAANSSTFEK MIHALVGGES  300
TTYKVPSRDD LKGWILEGEL KAMREHVREV VCSWGSTGCS ILLDGWTGEK GRNMVNFVVD  360
SPQGPIFLKS ADFSDSIGDV DAMISLISGV IDEVGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218223LRKRKP
2219250RKRKPSVIMEYSGSEQKDEKLQVLPNPEKKNK