PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403624.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 535aa MW: 59802 Da PI: 6.6719

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.2	3.2e-16	48	123	2	79
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt +e +L++ + ++ +++r+ ++W+ +s+k+ + g+ rs+ qC kwe+l +ykkik++e+kr + +s + XP_026403624.1 48 WTTEELVTLVTETVAIDAAFSRALPSIQKWKMISDKCTALGVGRSSDQCHRKWESLLVDYKKIKDWESKR--GLVSYW 123 ********************************************************************97..333355 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MKETEQAGDP QTFETPEKQK LRRGSRKRGS NSQVVSSRIT RSRLAADWTT EELVTLVTET 60 VAIDAAFSRA LPSIQKWKMI SDKCTALGVG RSSDQCHRKW ESLLVDYKKI KDWESKRGLV 120 SYWSLEKERK MEHELPISFD AELFKCLDES LKLQGYQSES DHGGSESEAE VEKLNDITIS 180 DLKKQSGSTQ GRQKSKRGPP KSKITETAKE QGKITVSVEP EGNVVETAEN ESIVAEETVK 240 KGRVGRPKVK ITETTEHNGD VTEATEQIGG IKQPAEEEGK AIEETVPKHR FGRPKTKVTE 300 TAEEEVIEEE GKAIEETVQK HRFGRPKTKV TETAEEEGNE KEGKAIEETV QKRRFGRPKT 360 KVTETAEEEG KVTEAALQKQ RFGRPKTKVT ESAEQKGERT VGAEQEGKVI ETAVQKGRVS 420 GLKRKSTDTT SEQKGKETET AEENGKSTKV DVQKRVGRPK SKVIEMTQKT RADVELIHAI 480 LRGDLNPKDI DLNEPRNPGM LQTETARRQA DDLIEVLGSL VDNLIQLTDM VEGRA

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MKETEQAGDP QTFETPEKQK LRRGSRKRGS NSQVVSSRIT RSRLAADWTT EELVTLVTET  60
VAIDAAFSRA LPSIQKWKMI SDKCTALGVG RSSDQCHRKW ESLLVDYKKI KDWESKRGLV  120
SYWSLEKERK MEHELPISFD AELFKCLDES LKLQGYQSES DHGGSESEAE VEKLNDITIS  180
DLKKQSGSTQ GRQKSKRGPP KSKITETAKE QGKITVSVEP EGNVVETAEN ESIVAEETVK  240
KGRVGRPKVK ITETTEHNGD VTEATEQIGG IKQPAEEEGK AIEETVPKHR FGRPKTKVTE  300
TAEEEVIEEE GKAIEETVQK HRFGRPKTKV TETAEEEGNE KEGKAIEETV QKRRFGRPKT  360
KVTETAEEEG KVTEAALQKQ RFGRPKTKVT ESAEQKGERT VGAEQEGKVI ETAVQKGRVS  420
GLKRKSTDTT SEQKGKETET AEENGKSTKV DVQKRVGRPK SKVIEMTQKT RADVELIHAI  480
LRGDLNPKDI DLNEPRNPGM LQTETARRQA DDLIEVLGSL VDNLIQLTDM VEGRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	8e-27	Trihelix family protein