PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026403395.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 292aa MW: 31473.1 Da PI: 4.5153 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.6e-05 | 270 | 292 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+k+F++ L++H + H XP_026403395.1 270 SCNTCSKTFNSEKGLESHTKAkH 292 6*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MEFWGVEVKP GVPHKVTFTE NRLIHISQAA LGETKKGNEN VVLFVNFNGK KLVVGTLSMD 60 KCPQIQCDLV FEKEFELCHN SKNGSVYFSG YKGFLGPESP SDDSDDSDSD DEIPLVANGK 120 PEPLEGSKVG SSEAKPKVKI VEPKKGDESE DDDSEDSSDE EESDEEDNKG ASDGTNDEDE 180 SDDDEDESDD DSDDDTPDKA KKRNKRSAET SASKTPADKK AKLMSTPQKS GADGKKGSGV 240 HIATPHPAKK AGKGDKSKQE TPKSAATPVS CNTCSKTFNS EKGLESHTKA KH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 7e-29 | C2H2 family protein |