PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026403379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Trihelix | ||||||||
Protein Properties | Length: 518aa MW: 56851.6 Da PI: 7.7175 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 52 | 1.8e-16 | 132 | 220 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + L++a+ ++ +l+rg+l++ +Weev+ ++ +++ +s +qCk+k +nl+kryk + +++++ +++s++p+f+++e XP_026403379.1 132 EWSDTAIGSLLDAYMDKFVQLNRGNLRGRDWEEVATVVsercDKQKGGKSVEQCKNKVDNLKKRYKVELNRMNNS-GTNVSHWPWFKKIE 220 5*********************************999977666677789*****************776555553.567779******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MASCDDDFSL LGDETQTPPP PTHHHHHNNE DYSEAGFGNN NAFGDENESN PFGEEESDPN 60 KSRGNSRSEK RKEQEELSDG GTTTPYSYKK PKSTTPNTNT PPPNNTTTIT ISTSSVGMDY 120 RYRGEYRKDR EEWSDTAIGS LLDAYMDKFV QLNRGNLRGR DWEEVATVVS ERCDKQKGGK 180 SVEQCKNKVD NLKKRYKVEL NRMNNSGTNV SHWPWFKKIE QIIGTSSTSS KGVSDEDKSP 240 GSSANMLRQQ PKRYAIIAPR PAGMVNSMNP KSLSTPRWRR VVFKISGAAL AGTGPQNIDP 300 KVVMLIAREV ATACRNGVEV AIVLGGRNFF CGDTWVGATG LERSVAYQIG MMATVMNSVL 360 LQSAIEKQGI QTRVQTAFPM NEVAEPYCKR RAIRHLEKGR VVIFGGVGAG SGNPLFTTDT 420 AAALRASEMN AEALLKGANI DGVYDCQSRN NTSTAFEHIS YREVVSRGVT SMDMMAITFC 480 EENGIPVVVF NLLEPGNISK ALCGDKVGTL IDQSGRVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 0.0 | Trihelix family protein |