PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403313.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 416aa MW: 46876.7 Da PI: 7.0123

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23	2e-07	247	269	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cgk F+r nL+ H+r H XP_026403313.1 247 HYCQICGKGFKRDANLRMHMRAH 269 68*******************99 PP
2	zf-C2H2	11.1	0.0012	345	368	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + XP_026403313.1 345 YVCNRCNqKQFSVLSDLRTHEKHC 368 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MISGNTNKSG FKQILYGVAD DVLSSSSLQD HTSSSNEDNK CQSNAFLYGF SVLKDKVHQV 60 QTLVDVAVLS QDQGVIQQPV ESVSMAIAGI GTLLQEIIVN ASSMMFTCQQ LALTTESNIN 120 SSYVAGMGSN DVHQLWRVHK VDDEVVGLPP TQLSDPHPSH VQIGSENGRD SSFFSDEHLE 180 WYGDNYNNYN TINVHDDITT TSKKVVVEEM RLLNEVEKKE VRTDGYSPTN YELIELDAAD 240 LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG EEYESTAALS NPMKSRNSNS MESNAECYSK 300 LVPIRKYSCP QEGCRWNKKH AKFQPLKSMI CVKNHYKRSH CPKMYVCNRC NQKQFSVLSD 360 LRTHEKHCGD LKWQCSCGTT FSRKDKLIGH CALFFGHTPA GNTSTKQEKF ELHTEQ

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MISGNTNKSG FKQILYGVAD DVLSSSSLQD HTSSSNEDNK CQSNAFLYGF SVLKDKVHQV  60
QTLVDVAVLS QDQGVIQQPV ESVSMAIAGI GTLLQEIIVN ASSMMFTCQQ LALTTESNIN  120
SSYVAGMGSN DVHQLWRVHK VDDEVVGLPP TQLSDPHPSH VQIGSENGRD SSFFSDEHLE  180
WYGDNYNNYN TINVHDDITT TSKKVVVEEM RLLNEVEKKE VRTDGYSPTN YELIELDAAD  240
LLAKYTHYCQ ICGKGFKRDA NLRMHMRAHG EEYESTAALS NPMKSRNSNS MESNAECYSK  300
LVPIRKYSCP QEGCRWNKKH AKFQPLKSMI CVKNHYKRSH CPKMYVCNRC NQKQFSVLSD  360
LRTHEKHCGD LKWQCSCGTT FSRKDKLIGH CALFFGHTPA GNTSTKQEKF ELHTEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-101	C2H2 family protein