PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403216.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 1608aa MW: 179123 Da PI: 6.2351

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00073	1517	1540	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +C+ Cgk+Fs++ n H+r+H XP_026403216.1 1517 QCThkGCGKRFSSHKNVILHQRVH 1540 688889****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1608 aa Download sequence
MSGVEIPNWL KKLPLAPEFY PTDTEFADPI AYISKIEKEA SAFGICKVIP PLPKPSKKYT 60 YSNLNKSLSK FPDLGSDFNS ALASSCSGSS SGDKNGDVKP VFTTRHQELG CSSKRSKGSV 120 RQSAIHKQVW QSGEVYTLEQ FETKSKVFAK NQLGTVKDVI PLTVETLFWK ASCEKPIYVE 180 YANDVPGSGF GEPDFPNRYF HKQRSKRKFS RNHRRNFGCE KREIDTERNS NIGKDSASYM 240 KIDSDPSSEA CKHSPSSVSM LSDECQRLSK SRSSDAVSDR EGSAGWKLSN CPWNLQVIAR 300 SPGSLTRFML EDIPGVTSPM IYIGMLYSWF AWHVEDHELH SLNYLHTGSP KTWYAVPGDR 360 ADAFEETVCS QGYGGNIDRL AALTLLGEKT NLLSPEVVVA SGLPCCRLVQ YPGEFVVTFP 420 RAYHVGFSHG FNCGEAANFG TPQWLKVAKE AAVRRAAMDL LPMLSHQQLL YMLTMSFISR 480 VPSALLLPGA RSSRLRDRQK EERELLVKKA FIDDMVSESN LLLAFLGKES TSYVVTWDSE 540 LLPSTIKDSG SSPSPSTFSE SCLMVDGERD LDTHNLVDEN IVGSCDSPVG RTELSMETGE 600 GLYENDNELP CGLHVDPGAL ACVACGILGF PFMSIVQPSH CASEKLLCLA DSQMVQEGQE 660 LLRSVKLPFP IDLNHSIYNP SDTQGEENQK ELVSLKHNDH ILMDIADHGR NFRSVDIDQD 720 TKGPPMHPRD NLDKQWSRVS GFLRPRIFCL EHGLEIEELL QSKGGADVLI ICHSAYQKIK 780 AHASAVAEEI GVSFNCKEVP LQSASQEDLK LINIAIDSEE HEEGGEDWTS RMGINLQYRV 840 KLKKLYPSKQ DNYALVLRGL PPDKSPNLDM SSLKWNSKKI RTPVMTTGLI HYKSCGDIQI 900 KEVKQVEISV RNKVIIDSGP IRSKSGKNLQ VKEDISFHIS ETDKVTVATS PNLSELCANK 960 HFKEDKAMIS SERFSVSGET SVGQCDSCDN SLTKEEKPVE ILETGSNIQA KNSREYKLGD 1020 NTQIEEDQSV EESERSKAFR ENTIILYSRR ARNQKMGFAS QPNSWANVRP RSKTDTPKES 1080 SAANETLDNK RIQSDGNLGD TGNSTVYGME LVKFPVMENC KLKSRDFTTT EISDISEASD 1140 PSKFTGSLIV EDVSIQLSGA QLDVASITED NRCVCKAPGD SRSSDIQGTA ILTNKSIETP 1200 SKNRNLEETD FEDKDFNCTV MDLSEIQQEA KTVAIESNLP MVMDIPETQH EGKTSADKSV 1260 VCNDACSTVE QKGPECAATK NSEMQLEAET SSPEPMVRHQ AKTMTKEKGS EDVIMDSLAV 1320 QHEDKINESN QPSSLVMLNP EHCHEDKVLT KESATRNQAN PFRQPKISVS VNGSSEVLQD 1380 IQDVDEAGVG CSTREDMDSE NTHPKAADTE PAKREGNKRS RELDQITKDQ ISFDGFIRGP 1440 CEGLRPRSSR TTAVYQTNSD ISVPEEVVLK KSRTQVDNVI THSGKNEVVK EAFACNIERC 1500 RMRFMTKTQL VVHKQNQCTH KGCGKRFSSH KNVILHQRVH AEERPLKCSW EGCSMSFKWA 1560 WARTEHLRLH TGERPYECKV SGCGLTFRFV SDYSRHRRKT GHYVNSPP

Sequence ? help Back to Top

Protein Sequence Length: 1608 aa Download sequence

MSGVEIPNWL KKLPLAPEFY PTDTEFADPI AYISKIEKEA SAFGICKVIP PLPKPSKKYT  60
YSNLNKSLSK FPDLGSDFNS ALASSCSGSS SGDKNGDVKP VFTTRHQELG CSSKRSKGSV  120
RQSAIHKQVW QSGEVYTLEQ FETKSKVFAK NQLGTVKDVI PLTVETLFWK ASCEKPIYVE  180
YANDVPGSGF GEPDFPNRYF HKQRSKRKFS RNHRRNFGCE KREIDTERNS NIGKDSASYM  240
KIDSDPSSEA CKHSPSSVSM LSDECQRLSK SRSSDAVSDR EGSAGWKLSN CPWNLQVIAR  300
SPGSLTRFML EDIPGVTSPM IYIGMLYSWF AWHVEDHELH SLNYLHTGSP KTWYAVPGDR  360
ADAFEETVCS QGYGGNIDRL AALTLLGEKT NLLSPEVVVA SGLPCCRLVQ YPGEFVVTFP  420
RAYHVGFSHG FNCGEAANFG TPQWLKVAKE AAVRRAAMDL LPMLSHQQLL YMLTMSFISR  480
VPSALLLPGA RSSRLRDRQK EERELLVKKA FIDDMVSESN LLLAFLGKES TSYVVTWDSE  540
LLPSTIKDSG SSPSPSTFSE SCLMVDGERD LDTHNLVDEN IVGSCDSPVG RTELSMETGE  600
GLYENDNELP CGLHVDPGAL ACVACGILGF PFMSIVQPSH CASEKLLCLA DSQMVQEGQE  660
LLRSVKLPFP IDLNHSIYNP SDTQGEENQK ELVSLKHNDH ILMDIADHGR NFRSVDIDQD  720
TKGPPMHPRD NLDKQWSRVS GFLRPRIFCL EHGLEIEELL QSKGGADVLI ICHSAYQKIK  780
AHASAVAEEI GVSFNCKEVP LQSASQEDLK LINIAIDSEE HEEGGEDWTS RMGINLQYRV  840
KLKKLYPSKQ DNYALVLRGL PPDKSPNLDM SSLKWNSKKI RTPVMTTGLI HYKSCGDIQI  900
KEVKQVEISV RNKVIIDSGP IRSKSGKNLQ VKEDISFHIS ETDKVTVATS PNLSELCANK  960
HFKEDKAMIS SERFSVSGET SVGQCDSCDN SLTKEEKPVE ILETGSNIQA KNSREYKLGD  1020
NTQIEEDQSV EESERSKAFR ENTIILYSRR ARNQKMGFAS QPNSWANVRP RSKTDTPKES  1080
SAANETLDNK RIQSDGNLGD TGNSTVYGME LVKFPVMENC KLKSRDFTTT EISDISEASD  1140
PSKFTGSLIV EDVSIQLSGA QLDVASITED NRCVCKAPGD SRSSDIQGTA ILTNKSIETP  1200
SKNRNLEETD FEDKDFNCTV MDLSEIQQEA KTVAIESNLP MVMDIPETQH EGKTSADKSV  1260
VCNDACSTVE QKGPECAATK NSEMQLEAET SSPEPMVRHQ AKTMTKEKGS EDVIMDSLAV  1320
QHEDKINESN QPSSLVMLNP EHCHEDKVLT KESATRNQAN PFRQPKISVS VNGSSEVLQD  1380
IQDVDEAGVG CSTREDMDSE NTHPKAADTE PAKREGNKRS RELDQITKDQ ISFDGFIRGP  1440
CEGLRPRSSR TTAVYQTNSD ISVPEEVVLK KSRTQVDNVI THSGKNEVVK EAFACNIERC  1500
RMRFMTKTQL VVHKQNQCTH KGCGKRFSSH KNVILHQRVH AEERPLKCSW EGCSMSFKWA  1560
WARTEHLRLH TGERPYECKV SGCGLTFRFV SDYSRHRRKT GHYVNSPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein