PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403048.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 654aa MW: 72080.6 Da PI: 8.7776

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.00019	74	94	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_026403048.1 74 CEICNKGFQRDQNLQLHRRGH 94 *******************88 PP
2	zf-C2H2	13.4	0.00022	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H + + XP_026403048.1 148 YKCEKCSKKYAVQSDWKAHSKIC 170 9******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MMSATDGSVS ANNPSSIMGF SQNSNPNPNQ AGAENTTTTP AIKKKRNLPG TPDPDAEVIA 60 LSPKSLMATN RFLCEICNKG FQRDQNLQLH RRGHNLPWKL KQRSSKEIRK KVYICPEKNC 120 VHHDPSRALG DLTGIKKHFS RKHGEKKYKC EKCSKKYAVQ SDWKAHSKIC GTKEYKCDCG 180 TLFSRKDSFI THRAFCDALA EESARFNPIA MPKNLSFRTD HHSLSMDARN NNPQSASLLH 240 AFNNREGLDA INDPQLCPIF RSDFTKPNMI NASAFDTHER KPRLSLWLDN QSNSQLNQQI 300 NDIAANSDAF LASKSAAGVG FPELSQMGST NIFGTSSPPP IVNYPGGIST QWMSRCNGES 360 TGVNLSLSTS PRGINKESDD LNQNSNNKGV MVENLASLYS SNNQSSPSSA SAAQHMSATA 420 LLQKAAQMGA TRSSPSFVGT YGVSSSSSDT TGFINPHHQH MDSTRNDFHQ LFRQQDKQQQ 480 QQQQQQQQPS SVQHDHDNNN LNQVVMMNTT NVNTDHHQQH QGLFSGLMNL SSLADSGNNN 540 LDRLMMSATA NNHNHEDINN NQEDQNQIKH QQSSPSGAPP PRPLKQLRHT IGGDASSSVP 600 AQQDHSLTRD FLGVGAVHHN VSSPFSQQEF VKFASMQGSA MDQHFSRYSS GGSH

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MMSATDGSVS ANNPSSIMGF SQNSNPNPNQ AGAENTTTTP AIKKKRNLPG TPDPDAEVIA  60
LSPKSLMATN RFLCEICNKG FQRDQNLQLH RRGHNLPWKL KQRSSKEIRK KVYICPEKNC  120
VHHDPSRALG DLTGIKKHFS RKHGEKKYKC EKCSKKYAVQ SDWKAHSKIC GTKEYKCDCG  180
TLFSRKDSFI THRAFCDALA EESARFNPIA MPKNLSFRTD HHSLSMDARN NNPQSASLLH  240
AFNNREGLDA INDPQLCPIF RSDFTKPNMI NASAFDTHER KPRLSLWLDN QSNSQLNQQI  300
NDIAANSDAF LASKSAAGVG FPELSQMGST NIFGTSSPPP IVNYPGGIST QWMSRCNGES  360
TGVNLSLSTS PRGINKESDD LNQNSNNKGV MVENLASLYS SNNQSSPSSA SAAQHMSATA  420
LLQKAAQMGA TRSSPSFVGT YGVSSSSSDT TGFINPHHQH MDSTRNDFHQ LFRQQDKQQQ  480
QQQQQQQQPS SVQHDHDNNN LNQVVMMNTT NVNTDHHQQH QGLFSGLMNL SSLADSGNNN  540
LDRLMMSATA NNHNHEDINN NQEDQNQIKH QQSSPSGAPP PRPLKQLRHT IGGDASSSVP  600
AQQDHSLTRD FLGVGAVHHN VSSPFSQQEF VKFASMQGSA MDQHFSRYSS GGSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	111	KLKQRSSKEIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-100	C2H2 family protein