PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402877.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 463aa MW: 51416.3 Da PI: 8.0268

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_026402877.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	16	3.4e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_026402877.1 134 WVCEKCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MLGNSNSSSS TVPPTEEFTC SENGSNSKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PEVKKRVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCEKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACNAGRIRSN LQTLQQPSAC LSRTASSPSP SSDTNYSTAH PWTDLRITNQ AENIFLCPDG 240 SSTPSPSDIH HHHNLELQLL PSSNPLMSTL DTSVSLHSDE NNVTQLQLSI GSCDTNQKQE 300 SNLLANSSKN GPGNVPGRDT MISIEEPAIA ASKMKEQARE QLKLAMAEKG FAEEARQQAK 360 RQIELAEQEF TNAKRIRQQA QAELDKAQIL KEHATKQINS TILQITCHSC KQQFQATVAT 420 SSAPPDENSL VVSYMSSAIT EGEGENENHT RSNNNNTTKG KIS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MLGNSNSSSS TVPPTEEFTC SENGSNSKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PEVKKRVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCEKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACNAGRIRSN LQTLQQPSAC LSRTASSPSP SSDTNYSTAH PWTDLRITNQ AENIFLCPDG  240
SSTPSPSDIH HHHNLELQLL PSSNPLMSTL DTSVSLHSDE NNVTQLQLSI GSCDTNQKQE  300
SNLLANSSKN GPGNVPGRDT MISIEEPAIA ASKMKEQARE QLKLAMAEKG FAEEARQQAK  360
RQIELAEQEF TNAKRIRQQA QAELDKAQIL KEHATKQINS TILQITCHSC KQQFQATVAT  420
SSAPPDENSL VVSYMSSAIT EGEGENENHT RSNNNNTTKG KIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-143	C2H2 family protein