PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402845.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 853aa MW: 98106.6 Da PI: 7.9086

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.4	3.1e-25	87	172	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYA++ GF v+k++s++s+ ++++++++f C ++g+++ +++ +r+r++ +++Cka ++vk++ dg w+v+++++eHnHel+ XP_026402845.1 87 SFYKEYARREGFGVSKRNSRRSRISKKFIDAKFACCRYGTKQASDRV----SRPRPTAKIDCKAAMHVKRKVDGAWYVYSFVKEHNHELS 172 5**************************************998877....9**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MSIDLERRPG EELNNGIHEH ESSACVRTRD STDGELYSVD KVDVNANVNM NYCVNDSASA 60 IASEGNENVH LDPREGMEFE SHEEAFSFYK EYARREGFGV SKRNSRRSRI SKKFIDAKFA 120 CCRYGTKQAS DRVSRPRPTA KIDCKAAMHV KRKVDGAWYV YSFVKEHNHE LSRDHAHFFR 180 CHRDTNPNKD KIRTTPTVGV RLNEVCPSLP ASFHGFQNDN CFVQGIKNDL GNGPWLALEV 240 GDAQALNEFF LHMQEENPNF FYALDLNRNQ NLRNVFWVDA KGRHDYIDFS DVISFDSIYA 300 TNGYKVPIAP FIGVNHHGHF ILFGCAILAD MNKSSFVWLF KTWLRAMGGQ APKVIVTEQG 360 NSMSEAVEEV FPNSRHCYCL WDITRKIPDK LTHVIKRDEN FMVKFNKCIY KSWTKVDFER 420 RWWKMVNRFE LREDCWIQSL YEDRQKWVPI YLNDTFLAGM STSQRSESIN FFFDRYVTKV 480 TTLKEFVEQY EVALHDRCEK EAHADFESRQ TVLPLKSPSP YEKQMSSIYT REIFKKFQYE 540 VMGAHACHPV KETEDDETVS FRVTDLERQQ EFRVVWNGTK LVVSCSCLSF GLRGFLCRHA 600 MIVLQFSGVF SIPTSYILKR WTKDAKNRHI LNQISNPVES RGQRYNDLCR RAIRLAEEGS 660 LSLESYNVAL LVLEEGINKC VAENDSLSSA GKPRLLTAYD LQNTADKEAD SIRRKVGSKR 720 IQSRTEKTNR KRPNEKINIG VDENVASVGM SETLQVMGQQ ESRTTMVDSY YGTQGSLQAM 780 GQWGSKAPVV NTNSCYATQD NLQEMGQWES RAPIGSYYGT QCNLLPMGPP GTRPPNTDTF 840 YTTPDNLRGM RNK

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MSIDLERRPG EELNNGIHEH ESSACVRTRD STDGELYSVD KVDVNANVNM NYCVNDSASA  60
IASEGNENVH LDPREGMEFE SHEEAFSFYK EYARREGFGV SKRNSRRSRI SKKFIDAKFA  120
CCRYGTKQAS DRVSRPRPTA KIDCKAAMHV KRKVDGAWYV YSFVKEHNHE LSRDHAHFFR  180
CHRDTNPNKD KIRTTPTVGV RLNEVCPSLP ASFHGFQNDN CFVQGIKNDL GNGPWLALEV  240
GDAQALNEFF LHMQEENPNF FYALDLNRNQ NLRNVFWVDA KGRHDYIDFS DVISFDSIYA  300
TNGYKVPIAP FIGVNHHGHF ILFGCAILAD MNKSSFVWLF KTWLRAMGGQ APKVIVTEQG  360
NSMSEAVEEV FPNSRHCYCL WDITRKIPDK LTHVIKRDEN FMVKFNKCIY KSWTKVDFER  420
RWWKMVNRFE LREDCWIQSL YEDRQKWVPI YLNDTFLAGM STSQRSESIN FFFDRYVTKV  480
TTLKEFVEQY EVALHDRCEK EAHADFESRQ TVLPLKSPSP YEKQMSSIYT REIFKKFQYE  540
VMGAHACHPV KETEDDETVS FRVTDLERQQ EFRVVWNGTK LVVSCSCLSF GLRGFLCRHA  600
MIVLQFSGVF SIPTSYILKR WTKDAKNRHI LNQISNPVES RGQRYNDLCR RAIRLAEEGS  660
LSLESYNVAL LVLEEGINKC VAENDSLSSA GKPRLLTAYD LQNTADKEAD SIRRKVGSKR  720
IQSRTEKTNR KRPNEKINIG VDENVASVGM SETLQVMGQQ ESRTTMVDSY YGTQGSLQAM  780
GQWGSKAPVV NTNSCYATQD NLQEMGQWES RAPIGSYYGT QCNLLPMGPP GTRPPNTDTF  840
YTTPDNLRGM RNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein