PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402705.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 560aa MW: 63863 Da PI: 5.297

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.1	4.6e-24	194	247	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+++ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYR+ XP_026402705.1 194 KARVVWSVDLHQKFVKAVNHI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRM 247 68*****************.9*****************************8 PP
2	Myb_DNA-binding	36	1.6e-11	196	246	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+ G + +k+I m+ +t++++ s++qky+ XP_026402705.1 196 RVVWSVDLHQKFVKAVNHIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 246 678***********************************************7 PP
3	Response_reg	78.4	2.6e-26	10	117	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l k +y ev+++ ++eal+ l+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_026402705.1 10 VLVVDDDPTWLKILEKMLIKCNY-EVTTCCLAREALDVLRERKggFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 102 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a d+l Kp+ ++el+ XP_026402705.1 103 ACDYLLKPVRMKELR 117 ********99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MEKFPAGLRV LVVDDDPTWL KILEKMLIKC NYEVTTCCLA REALDVLRER KGGFDIVISD 60 VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP VRMKELRIIW 120 QHVFRKKMQE VKEIESREGI EDALKMRNGL YEFDAISHLL SGDNSDSSSA KKRKDMENHD 180 LDENDFNDLS SSKKARVVWS VDLHQKFVKA VNHIGFDKVG PKKILDLMNV PWLTRENVAS 240 HLQKYRMYLS RLQKHNDPKN TFGSIKQPDI TFKDHPPTSF SFQSSSTMQQ RSTSPSCSFG 300 YSANNVHIQD VSSTNMHEDV NGIGSSFMSA IEPKEASSDD VIAARKASHK SLASITPQQI 360 SWGRETQQTP FMEEPKEEHK PYRYIDQPQP SLEHQMNQHQ PLPFAISGTL VTAERGRSLA 420 RDVVSPYTRC TTDLFSAQSD TDSTVNAQAF GEMFSRLPSI KNHNLEQDLL LDLEPEQQYF 480 IKRSGSTSVS SEEDHQQLVS VQDYGYFENV EPNNRCILDD YSEPITELSS SQLYDGQKLN 540 SAYLYEIMEY PNVDQLLFIT

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MEKFPAGLRV LVVDDDPTWL KILEKMLIKC NYEVTTCCLA REALDVLRER KGGFDIVISD  60
VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP VRMKELRIIW  120
QHVFRKKMQE VKEIESREGI EDALKMRNGL YEFDAISHLL SGDNSDSSSA KKRKDMENHD  180
LDENDFNDLS SSKKARVVWS VDLHQKFVKA VNHIGFDKVG PKKILDLMNV PWLTRENVAS  240
HLQKYRMYLS RLQKHNDPKN TFGSIKQPDI TFKDHPPTSF SFQSSSTMQQ RSTSPSCSFG  300
YSANNVHIQD VSSTNMHEDV NGIGSSFMSA IEPKEASSDD VIAARKASHK SLASITPQQI  360
SWGRETQQTP FMEEPKEEHK PYRYIDQPQP SLEHQMNQHQ PLPFAISGTL VTAERGRSLA  420
RDVVSPYTRC TTDLFSAQSD TDSTVNAQAF GEMFSRLPSI KNHNLEQDLL LDLEPEQQYF  480
IKRSGSTSVS SEEDHQQLVS VQDYGYFENV EPNNRCILDD YSEPITELSS SQLYDGQKLN  540
SAYLYEIMEY PNVDQLLFIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-119	ARR-B family protein