PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026402669.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 374aa    MW: 42844 Da    PI: 6.6622
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026402669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix85.37.5e-2771153286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W  +e+++Li +rrem+  ++++k++k+lWe++s kmre+gf rsp +C++kw+nl k++kk+k+++ ++  ++s + +y+++l+
  XP_026402669.1  71 WVSEETRLLISLRREMDGLFNTSKSNKHLWEQISTKMREKGFDRSPSMCTDKWRNLLKEFKKMKHHQDRG--GVSLKLAYYKELD 153
                     ********************************************************************97..888899****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MYLSEKSNQI DFYNNKEVEE EREMIMEVVN NGGLHPHHHH HQQQPQQQMV LADSSGSDHE  60
MRPPKKRAET WVSEETRLLI SLRREMDGLF NTSKSNKHLW EQISTKMREK GFDRSPSMCT  120
DKWRNLLKEF KKMKHHQDRG GVSLKLAYYK ELDELIKERN KNVTYSKNTT PLSTKVDAYI  180
QFSDKGIEDA AIPFGPVEEG GRSAALNLEK SLDQDRQPLA ITAAEAVGGS GIPPWNWRGT  240
SGNGGEGIHS FAGRVISVKW RDFTRKIGID GTTDAIKEAI KSAFGLRTRR AFWLEDEAEV  300
IRSLDRDMPL GTYTLHLDDE EKTFYTEEDF RDLLTRRGWT GLRELNAFRS VDSNALRSVD  360
SLDELRPGAV YQGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.11e-144Trihelix family protein