PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026402668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 393aa MW: 45052.6 Da PI: 6.6609 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 85.2 | 8.2e-27 | 71 | 153 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W +e+++Li +rrem+ ++++k++k+lWe++s kmre+gf rsp +C++kw+nl k++kk+k+++ ++ ++s + +y+++l+ XP_026402668.1 71 WVSEETRLLISLRREMDGLFNTSKSNKHLWEQISTKMREKGFDRSPSMCTDKWRNLLKEFKKMKHHQDRG--GVSLKLAYYKELD 153 ********************************************************************97..888899****998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 393 aa Download sequence |
MYLSEKSNQI DFYNNKEVEE EREMIMEVVN NGGLHPHHHH HQQQPQQQMV LADSSGSDHE 60 MRPPKKRAET WVSEETRLLI SLRREMDGLF NTSKSNKHLW EQISTKMREK GFDRSPSMCT 120 DKWRNLLKEF KKMKHHQDRG GVSLKLAYYK ELDELIKERN KNVTYSKNTT PLSTKVDAYI 180 QFSDKGIEDA AIPFGPVEEG GRSAALNLEK SLDQDRQPLA ITAAEAVGGS GIPPWNWRGT 240 SGNGGEGIHS FAGRVISVKW RDFTRKIGID GTTDAIKEAI KSAFGLRTRR AFWLEDEAEV 300 IRSLDRDMPL GTYTLHLDDE ITIKICFYDD SGRISIRPEE KTFYTEEDFR DLLTRRGWTG 360 LRELNAFRSV DSNALRSVDS LDELRPGAVY QGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G13450.1 | 1e-154 | Trihelix family protein |