PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402114.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 434aa MW: 50379.8 Da PI: 6.5817

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.8	2.4e-20	63	144	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +Y++YAk++GF +k++skk ng+ + tf+C +egk+++ +++ + ++ +tgCkakl+ ++e d+kw+++ l+leHnH+ XP_026402114.1 63 CYRRYAKRMGFPCKKRSSKKD--NGQLRHVTFTCIREGKNKRVTDA---SVVLNPPIKTGCKAKLTARLEPDDKWRISVLVLEHNHQ 144 7************999887..999**********998777...88999******************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MDVSEIENVE LGESHDGLNE KSDKGGKEII EVVDDDVTID EEGEVAMPKM GMEFDTVEEI 60 YECYRRYAKR MGFPCKKRSS KKDNGQLRHV TFTCIREGKN KRVTDASVVL NPPIKTGCKA 120 KLTARLEPDD KWRISVLVLE HNHQNIPIEA RYWRYNKVIS NPVKRKHLLN DKEGTRMHEL 180 YHTVAVENIP EIVAVQSPQG TFSLNRCDIG ETQFYKFDND KSHEKFHPGQ VWASYCKLDD 240 MPKYYVEISR VEVFPDFKLY AKWLEPSAPP REVIKWLDEK MPVCCGTFKA GKEEVFSDTA 300 YISHLATGVS VNKQSLYEIY PKKGEVWAMY RNFNSDWTCN DLKNCECDVV EVLEVYDVRW 360 LIVLVLVQVA GFKTVFKAKR EAAYDYIMGI PWIELFRFSH QIPVFRFTEV RYGSLRGCLE 420 LDPKSMPTCL FPLK

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MDVSEIENVE LGESHDGLNE KSDKGGKEII EVVDDDVTID EEGEVAMPKM GMEFDTVEEI  60
YECYRRYAKR MGFPCKKRSS KKDNGQLRHV TFTCIREGKN KRVTDASVVL NPPIKTGCKA  120
KLTARLEPDD KWRISVLVLE HNHQNIPIEA RYWRYNKVIS NPVKRKHLLN DKEGTRMHEL  180
YHTVAVENIP EIVAVQSPQG TFSLNRCDIG ETQFYKFDND KSHEKFHPGQ VWASYCKLDD  240
MPKYYVEISR VEVFPDFKLY AKWLEPSAPP REVIKWLDEK MPVCCGTFKA GKEEVFSDTA  300
YISHLATGVS VNKQSLYEIY PKKGEVWAMY RNFNSDWTCN DLKNCECDVV EVLEVYDVRW  360
LIVLVLVQVA GFKTVFKAKR EAAYDYIMGI PWIELFRFSH QIPVFRFTEV RYGSLRGCLE  420
LDPKSMPTCL FPLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	4e-16	FAR1 family protein