PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401756.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 796aa MW: 86427.4 Da PI: 6.2228

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.2	1.2e-29	94	178	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+ aL+++r++m+ ++r++ lk+plWe+vs+k++e gf rs+k+Ckek+en++k+yk++keg+ +r++++s +++f+qlea XP_026401756.1 94 RWPRQETIALLKIRSDMDAAFRDATLKGPLWEDVSRKLAELGFIRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFTQLEA 178 8*******************************************************************866665..*****85 PP
2	trihelix	108.2	5.4e-34	524	609	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +e+r++++ k+plWee+s+ m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf+ql+a XP_026401756.1 524 RWPKTEVLALIKLRSGLESRYQEAGPKGPLWEEISAGMGRMGYSRSAKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHQLDA 609 8*******************************************************************8.99999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MQQGGPQYGV SPEMSNNPAD HHLQQQQRQH KSLSVDATVV TAEAASPISC RPPASGSFEE 60 LVGAPGSGGG GFQDEDGFGG EETERGSAGG GGNRWPRQET IALLKIRSDM DAAFRDATLK 120 GPLWEDVSRK LAELGFIRSA KKCKEKFENV HKYYKRTKEG RAGRQDGKSY RFFTQLEALH 180 GTTTTTATPT HSLPPLPITS ATTTNQGVSP LPMGIGMVGS ATSGRIQPPP SDSAAIPTAQ 240 IGVPRSDYQT PPPQPPTTGI SGSSAAAAVA AGISFSSNTS SSSGDSDSDE DLDEGGGPSS 300 NPTDTRKRKR GGSGGVSVGG STSHRMMHFF EGLMKQVMEK QEAMQQRFLE TIEKREQDRM 360 IREEAWKRQE MARLTREHEM MAQERAISAS RDAAVIAFLQ KITGQTIQLP SPVIIPAPTP 420 PAPVQAPPPT PTPQPQSIPP PTAPTPSPPP PPSQPKQQKQ HQHHQIVRHQ PQQQPPPQSQ 480 SSEVIITHHH QPTSADHVII AVPEQQHPPA QEMGSGGFDS ASSRWPKTEV LALIKLRSGL 540 ESRYQEAGPK GPLWEEISAG MGRMGYSRSA KRCKEKWENI NKYFKKVKES NKKRPEDAKT 600 CPYFHQLDAL YRKKVHGGSN QTKQESPIDQ NQSSNTSSSS MDPNQSSTTL QAIMAPPPPP 660 PQTNANESAA ETYEKNNNNG GGGSNVEGAA SVAKKPEDIV KELMEQRQNN HHQQPQPMTM 720 GNYGKLTGED SDNIEDDEEM DDLDDDDDED TTEEIEDEDR NTSKMNYKIE FQNRQNTGSS 780 NGAANTAAST FLAMVQ

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MQQGGPQYGV SPEMSNNPAD HHLQQQQRQH KSLSVDATVV TAEAASPISC RPPASGSFEE  60
LVGAPGSGGG GFQDEDGFGG EETERGSAGG GGNRWPRQET IALLKIRSDM DAAFRDATLK  120
GPLWEDVSRK LAELGFIRSA KKCKEKFENV HKYYKRTKEG RAGRQDGKSY RFFTQLEALH  180
GTTTTTATPT HSLPPLPITS ATTTNQGVSP LPMGIGMVGS ATSGRIQPPP SDSAAIPTAQ  240
IGVPRSDYQT PPPQPPTTGI SGSSAAAAVA AGISFSSNTS SSSGDSDSDE DLDEGGGPSS  300
NPTDTRKRKR GGSGGVSVGG STSHRMMHFF EGLMKQVMEK QEAMQQRFLE TIEKREQDRM  360
IREEAWKRQE MARLTREHEM MAQERAISAS RDAAVIAFLQ KITGQTIQLP SPVIIPAPTP  420
PAPVQAPPPT PTPQPQSIPP PTAPTPSPPP PPSQPKQQKQ HQHHQIVRHQ PQQQPPPQSQ  480
SSEVIITHHH QPTSADHVII AVPEQQHPPA QEMGSGGFDS ASSRWPKTEV LALIKLRSGL  540
ESRYQEAGPK GPLWEEISAG MGRMGYSRSA KRCKEKWENI NKYFKKVKES NKKRPEDAKT  600
CPYFHQLDAL YRKKVHGGSN QTKQESPIDQ NQSSNTSSSS MDPNQSSTTL QAIMAPPPPP  660
PQTNANESAA ETYEKNNNNG GGGSNVEGAA SVAKKPEDIV KELMEQRQNN HHQQPQPMTM  720
GNYGKLTGED SDNIEDDEEM DDLDDDDDED TTEEIEDEDR NTSKMNYKIE FQNRQNTGSS  780
NGAANTAAST FLAMVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-48	Trihelix family protein